Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02496 ATGGCTGGAGTTACGAAGGGGGAAGAGTCGGGTTCGAGTAGTCCTAGTTGGGGTGCTGCTTCGTTTTTTATGCAGACAACGGAAGATGTGGCTAAAGCCGTTGCTGCTGCGATGAATGCTCCAAGGCCGTCTGTTATATATTCATCCAAAAATGAGCAGGGTGGTAGTCAGCTTCAAAGGCTTCAGTATCAAGTTACGAAAATGATTAAAGGGTTTTCTCGTCCACCTGAAGTTAAATATGCAAATTACAATCCGGAAATCTTGACTAGTCAGAAGCGTCAATGGGCTGCGAACTTTCATTTGCAGTACAATGATCATAGGTCTTGGAAGGAGCCAACAAGGTTGTTTGAAAGTATGGTGATTGTTGGACTTCATCCTAACTGTGACATTGAGGCACTGCAAAGGCAATGTTTGGATAGAAAATCTGAAGACTCTGGTAGTGGTAAATTCAGAAGTGTAATTGGTTATCAGAATCAATCACGTGTGGAGCCTAATGTTGAACCTCAGGTCTTGTTCATTTACCCTCCAGAAAAGCAGCTCCCTCTTAAAGAAAAGGATCTTCTTTCTTTCTGTTTCCCTGGCGGCGTTGAGGTTAATGCTGTTGAGAAAACCCCTTCGATGAGTGAATTGAATGAAATTCATTTCGGGCAGGAACACCTTAAACAAAGAGATCTGTCTTTTGTATTTAGGTTACAGGGTGCTGATAATTCAACACTTTATGGGTGTTGTGTCTTAGTTGAAGAGCTAGTGCATAAACCCTCTGGATTGATTTCTATGCTTTCAGATAAGCGGTTATCTAACCCTTCTTTGAGACGCCATTTATTAACCACACAAAGGTGTTACTGCATTCTCACAAGGCTTCCATTTTTTGAGTTGCACTTTGGTGTATTGAACAGCATCTTCATGCAAGAAAGGCTAGAACGGTTGTCAAGAAGTGTTGAATATTTAGATTTAGAATATGATGAAGGGAGTAATGAGGACGACAAACTTGATGAGAATTCAAGAATTTCTCAATCAAACCCAAGAAATTCTGTACCCAATAACATTGAGGGTGATAGTAATCATCTAGAGAAACAAATGGTCAATGAGGAGCTACATACACTTAAGGAGGGAGCAGATGATGATGATATCGTGCCTATTCATCCTGAAACTGATAGAAAAATTGCCAAACAAGAATCTGGCCCTACAGTTTCTGAAGACAATAATATGTATGGCGATGCTTTGGTAACAAATAAACAGTCAGAAGATAGGCGTGTACCAACTTCTATTTTCCCCGTCCTGCGGAATTGGCAATATGAAAGCTCCGAATCTTCCTGCAGTTTTCAAGGATCACCTTGTGAAGATAGAAATTTTAGGAGTGATGCTGATGATACTGAGACAGAAGAGGCTTCATTCTCAGGACAAGAGGATATAACTGACCTACATGAGATTCTTGAATGGGCCAAGGCAAATAATTGTGGACCATTACAAATTATTAGTGAGTATTATCGTTTTAGTTGCCCTACAAGAGGATCAACACTTATCTTTCATCCTTTGGAGCACCTTCATCCCTTGGAATATCACCGGCTAGATGAGAATGCTCTTTATCCCTCTGGTTCGACTGTTGATTTGAAATCCTGTAATACGAGTGGGGAATTAGCCGAGGCATATAACTCGCTTCTGGTTGCAGAGGAGGCAACTGCATTATCTATATGGGCAGTAGCGTGCTTATGTGGTACCTTAAGACTAGAACATGTGTTGACATTCTTTGCAGGAGCTCTACTGGAGAAACAGATAGTTGTTGTCTGTTCTAATTTGGGAATTCTGTCTGCATCAGTTTTATCAGTTATTCCACTAATTCGACCCTACCAATGGCAAAGCCTGCTAATGCCGGTTTTACCAAATGACATGCTTGACTTTCTGGATGCTCCTGTCCCTTACATAGTTGGTGTGAGGAACAAGACAAGTGAAGTTCAGTCAAAGTTAACCAATGTTATTCTGGTTGATACCAACAAAAACCAGGTGAAGTCACCATCACTACCTCAACTGCCAAGACAGAAAGAGCTAATGTCTTCTTTACGTCCTTATCATACAACTCTTGTTGGAGAAAGTTACCTGGGCAGGAGAAGGCCGGTGTACGAATGCACTCCAATGCAGATGGAAGCTGCCAAGGAATTCTTATCAATATTAAGGTCTTATTTGGATTCCCTTTGCCAAAACATCCGTTCACATACAATAACCAATGTACAATCCAATGACGATAAGGTATCCTTGCTTTTGAGGGAGAGTTTCATCGACTCATTCCCTTATCGTGATCAACCTTTTATGAAGCTTTTCGTCGATACACAACTCTTCTCGGTACACACAGATCTTGTTCTCTCTTTTTTCCAAAAGGAATAG 2379 0.4098 MAGVTKGEESGSSSPSWGAASFFMQTTEDVAKAVAAAMNAPRPSVIYSSKNEQGGSQLQRLQYQVTKMIKGFSRPPEVKYANYNPEILTSQKRQWAANFHLQYNDHRSWKEPTRLFESMVIVGLHPNCDIEALQRQCLDRKSEDSGSGKFRSVIGYQNQSRVEPNVEPQVLFIYPPEKQLPLKEKDLLSFCFPGGVEVNAVEKTPSMSELNEIHFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVHKPSGLISMLSDKRLSNPSLRRHLLTTQRCYCILTRLPFFELHFGVLNSIFMQERLERLSRSVEYLDLEYDEGSNEDDKLDENSRISQSNPRNSVPNNIEGDSNHLEKQMVNEELHTLKEGADDDDIVPIHPETDRKIAKQESGPTVSEDNNMYGDALVTNKQSEDRRVPTSIFPVLRNWQYESSESSCSFQGSPCEDRNFRSDADDTETEEASFSGQEDITDLHEILEWAKANNCGPLQIISEYYRFSCPTRGSTLIFHPLEHLHPLEYHRLDENALYPSGSTVDLKSCNTSGELAEAYNSLLVAEEATALSIWAVACLCGTLRLEHVLTFFAGALLEKQIVVVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNDMLDFLDAPVPYIVGVRNKTSEVQSKLTNVILVDTNKNQVKSPSLPQLPRQKELMSSLRPYHTTLVGESYLGRRRPVYECTPMQMEAAKEFLSILRSYLDSLCQNIRSHTITNVQSNDDKVSLLLRESFIDSFPYRDQPFMKLFVDTQLFSVHTDLVLSFFQKE 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02496 792 Gene3D - 563 732 IPR043153 -
Trre3g02496 792 ProSiteProfiles Tripartite DENN domain profile. 150 792 IPR037516 -
Trre3g02496 792 Pfam DENN (AEX-3) domain 514 665 IPR001194 -
Trre3g02496 792 MobiDBLite consensus disorder prediction 437 468 - -
Trre3g02496 792 SMART uDENN_cls 112 247 IPR005113 -
Trre3g02496 792 SMART DENN_cls 276 666 IPR001194 -
Trre3g02496 792 Pfam uDENN domain 168 245 IPR005113 -
Trre3g02496 792 MobiDBLite consensus disorder prediction 322 352 - -
Trre3g02496 792 Gene3D - 105 316 - -
Trre3g02496 792 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 48 788 - -
Trre3g02496 792 MobiDBLite consensus disorder prediction 336 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02496 Trre-Chr3 24428336 24443865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02496 - - gmx:100782148 1241.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02496 3 24428336 24443865 Trre3g02496 3 24428336 24443865 ECH
Trre15g05139 15 61040264 61051445 Trre3g02496 3 24428336 24443865 PCT