Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02478 ATGGCTTCCACTTTTGCGGTTTCAATGGCAATGTCATTGCCACTAACTTACGCCAGCCAGAAGAGGGTGGTCAATAGTTCAGAGGCATTCTTCAATCCACTGCCTACTCGGTATACAAAGGCTGTCGCATCGTCAAAACGCAATGGAAGATTTCAAGTCAGGGCCTCCATGAAGGAGAAAGTTGTGACAGGGCTCACAGCAGCTGCATTGACAGCTTCAATGGTGGTTCCTGATGTGGCTGAAGCTGCCGTTTCACCTTCTCTCAAGAACTTCTTGCTCAGCATCGCAGCTGGTGGAATTGTGGTTGTTGTCATCCTTGGTGCTGTGATTGCTGTATCCAATTTTGATCCCGTCAAGCGAAACTGA 366 0.4836 MASTFAVSMAMSLPLTYASQKRVVNSSEAFFNPLPTRYTKAVASSKRNGRFQVRASMKEKVVTGLTAAALTASMVVPDVAEAAVSPSLKNFLLSIAAGGIVVVVILGAVIAVSNFDPVKRN 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02478 121 Pfam Photosystem II reaction centre X protein (PsbX) 84 120 IPR009518 GO:0009523|GO:0015979|GO:0016020
Trre3g02478 121 PANTHER OS07G0673550 PROTEIN 1 120 - -
Trre3g02478 121 Gene3D Single helix bin 83 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02478 Trre-Chr3 24138216 24138581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02478 - - gmx:100306291 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g05147 15 61112322 61112681 Trre3g02478 3 24138216 24138581 PCT