Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02403 ATGGCAATTTCCGATGTACCGGAAAGTACCATAACCACCGCAACTGCAACCGTAACAACCGTCCAAACCGACTCAGATCTCCGACACTCTTCTCTACGTCGAAGACAGAGCGCCACATCAACCGGAGGCCTTTTCGACGCCGAAAGTGCAGCTCAAGATGCGGTTAGAGATTCAGGCTCCGACGATTCATTGAACGGTAAGAACATCGAAGATGTTAAGGATCGAAAAACGGATCATGCAGGAATTGATAATGCGGTTGAAAATAACGTCACTGATCAAGAAAATGTCACCGATGTCACCGATTTCAAATTCACTTACCGTCCTTCAGTTCCCGCTCACCGGAGAATCAAAGAAAGTCCTCTTAGCTCCGGCAACATTTTTAGACAGAGTCATGCAGGACTGTTCAATCTCTGTATTGTGGTGCTAGTTGCAGTGAACAGCAGGCTTATCATTGAGAATCTAATGAAGTATGGATGGTTGATTAGGTCTGGCTTTTGGTTTAGTTCAAAATCCTTCAGAGATTGGCCTCTCTTCATGTGTTGTCTTAGTCTTGCAATATTTCCACTTGCTGCCTTTGCAGTTGAAAAGTTAGCACAAAAAAAGAGTATTTCCGAACCAGTTGTTGTTCTACTACATATTGTAATTACAACTGTTGCAATTATCTATCCAGTTTTAGTAATCCTCAGGTGTGATTCTGCTTTTTTATCAGGTGCCACATTGATGCTATTGACTTGCATCGTGTGGTTAAAATTGGTGTCGTATGCACATACAAGCTATGATATGAGAGCGCTCACGGTTTCAAATGAAAAGATAGCAAAGGGAGAAACAGTGCCCGATACTTTGGAGATGGAGTACCCACACAATGTGAGCTTCAATAGTTTGGCATACTTCATGGTTGCTCCTACATTATGCTACCAGCCAAGCTATCCTCGCACACCTTCGGTTCGAAAGGGTTGGATCTGTCGACAACTTCTCAAGCTGATAATATTTACAGGAGTTATGGGATTTATAATAGAACAATATATGAACCCTATTGTCCAGAATTCACAACATCCTTTGAAGGGAAACTTTCTATATGCCATTGAAAGGATTCTGAAGCTTTCCGTTCCAAATGTTTATGTTTGGCTCTGCATGTTCTACTGCTTTTTCCATCTTTGGTTAAATATACTTGCGGAGCTTTTACGGTTTGGTGATCGCGAGTTCTACAAAGATTGGTGGAATGCCCAAACAGTTGAAGAGTATTGGAGGATGTGGAATATGCCTGTGCATAAATGGATGGTTCGTCATGTGTATTTTCCATGCATAAGGTTTGGTATACCCAAGGGTGCTGCTGCTTTGATTGCTTTTCTGGTTTCTGCTGTGTTCCATGAGTTATGCATTGCTGTTCCTTGCCACATGTTCAAGTTGTGGGCGTTTATTGGAATTATGTTTCAGGTTCCTTTGGTCTTGATAACTAATTACCTGAAAAACAAATACAAAAACTCAATGGTTGGAAATATGATTTTTTGGTTCATATTTTGTATTCTTGGTCAACCTATGTGCGTACTACTATATTATCATGACTTGATGAATAGGAAAGGGGAAATTGACTGA 1593 0.4099 MAISDVPESTITTATATVTTVQTDSDLRHSSLRRRQSATSTGGLFDAESAAQDAVRDSGSDDSLNGKNIEDVKDRKTDHAGIDNAVENNVTDQENVTDVTDFKFTYRPSVPAHRRIKESPLSSGNIFRQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIRSGFWFSSKSFRDWPLFMCCLSLAIFPLAAFAVEKLAQKKSISEPVVVLLHIVITTVAIIYPVLVILRCDSAFLSGATLMLLTCIVWLKLVSYAHTSYDMRALTVSNEKIAKGETVPDTLEMEYPHNVSFNSLAYFMVAPTLCYQPSYPRTPSVRKGWICRQLLKLIIFTGVMGFIIEQYMNPIVQNSQHPLKGNFLYAIERILKLSVPNVYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAQTVEEYWRMWNMPVHKWMVRHVYFPCIRFGIPKGAAALIAFLVSAVFHELCIAVPCHMFKLWAFIGIMFQVPLVLITNYLKNKYKNSMVGNMIFWFIFCILGQPMCVLLYYHDLMNRKGEID 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02403 530 Pfam MBOAT, membrane-bound O-acyltransferase family 274 517 IPR004299 -
Trre3g02403 530 PIRSF Oat_dag 1 530 IPR027251 GO:0004144|GO:0019432
Trre3g02403 530 MobiDBLite consensus disorder prediction 25 80 - -
Trre3g02403 530 PANTHER STEROL O-ACYLTRANSFERASE 64 526 IPR014371 GO:0008374
Trre3g02403 530 PIRSF Oat_ACAT_DAG_ARE 5 530 IPR014371 GO:0008374
Trre3g02403 530 MobiDBLite consensus disorder prediction 63 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02403 Trre-Chr3 23008863 23016885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02403 58 530 Lipid Metabolism Gene Families AT2G19450 68.548 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02403 K11155 - gmx:547982 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02403 3 23008863 23016885 Trre3g02403 3 23008863 23016885 ECH
Trre15g05174 15 61277992 61285022 Trre3g02403 3 23008863 23016885 PCT