Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05174 ATGGCGATTTCCGACGAGCAGCCTCAACCTGTACGCAACACCTCAATTCTCAACCAGTCCTCTGTTTTGCGCCGCAGACCGAGTGCCACCTCAGTCAACGGCTTGTTCGATTCATCTACCACGGTCGAGGGTGAGAGTTCCGGTGAAGAGTTAGTCAAGGACTCTAGCTCCGACGAATCTATCAGTGGCGACCAAAACATCGCCGGCAATACAGAGCAGAAGCGAGTGAATGATATTTCTTCTATCAAATATGCTTACCGTCCTTCTGTTCCTGCTCATCGCAAAATCAAGGAAAGTCCACTCAGCTCCGATAACATTTTCCGTCAGAGTCATGCGGGTCTATTCAACCTCTGTATAGTAGTCCTTGTTGCAGTCAATAGCAGACTTATCATTGAGAATTTAATGAAGTACGGTTGGTTGATTAAGACTGGTTTTTGGTTTAGTTCAAAATCATTAAGAGATTGGCCCCTCTTCATGTGTTGTCTTAGTCTTGCAATATTTCCTTTGGTGGCTTTTATAGTGGAAAAGTTGGCACAACAAAAGCGTATTTCTGAACCAATTGTTGTTCTATTTCATATAATCATTACAACAACTGCTATTCTCTATCCCATTTTTGTAATCCTCAGGTCTGATTCTGCTTTTGTGTCAGGCGTCACATTGATGCTACTTGCTTGCATTGTATGGTTAAAACTGATTTCTTATGCACATACGAACTATGATTTGAGAGCACTTACCAATTCAATTGAAAAGGGAGAAGTGCTTCCCAATACTTTGAATATGGACTATCCATACGATGTGAGCTTCAAAAGCATTGCTTACTTTATGGTTGCGCCTACATTATGTTACCAGCCAAGATATCCTCGCAGCCCTTTTATACGAAAGGGTTGGGTGTTACGTCAACTTGTCAAGCTGATAATATTTACTGGAGTTATGGGATTTATAATAGAACAATATATTAATCCTATTGTACAAAATTCCCAGCATCCTTTTAAGGGAGACCTCCTATATGCCATTGAAAGAGTTCTGAAGCTGTCTGTTCCAAATCTATATGTGTGGCTCTGCATGTTCTACTGCTTTTTCCACCTTTGGTTGAATATACTGGCAGAGCTTCTTCGATTTGGTGACCGTGAATTTTACAAGGATTGGTGGAATGCCAGAACTGTTGAAGAGTATTGGAGGATGTGGAATATGCCTGTTCACAAATGGATGATTCGTCACCTGTATTTTCCATGTTTAAGGAGTGGTATACCCAAGGGCGGTGCTGTTTTAATTGCCTTCCTGGTTTCTGCTTTGTTCCATGAGTTGTGCATCGCTGTTCCTTGCCACATATTCAAGTTGTGGGCTTTTAGTGGAATTATGTTTCAGGTTCCTTTGGTCATCATAACTAATTATCTACAAAATAAATTCAGCAACTTAATGGTTGGAAATATGTTTTTTTGGTTCACATTCTGTATTCTTGGTCAACCTATGTGCGTACTACTATACTACCATGACTTGATGAATAGGGAAAACAAACTCGACCAAAGCTAA 1530 0.4059 MAISDEQPQPVRNTSILNQSSVLRRRPSATSVNGLFDSSTTVEGESSGEELVKDSSSDESISGDQNIAGNTEQKRVNDISSIKYAYRPSVPAHRKIKESPLSSDNIFRQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIKTGFWFSSKSLRDWPLFMCCLSLAIFPLVAFIVEKLAQQKRISEPIVVLFHIIITTTAILYPIFVILRSDSAFVSGVTLMLLACIVWLKLISYAHTNYDLRALTNSIEKGEVLPNTLNMDYPYDVSFKSIAYFMVAPTLCYQPRYPRSPFIRKGWVLRQLVKLIIFTGVMGFIIEQYINPIVQNSQHPFKGDLLYAIERVLKLSVPNLYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNARTVEEYWRMWNMPVHKWMIRHLYFPCLRSGIPKGGAVLIAFLVSALFHELCIAVPCHIFKLWAFSGIMFQVPLVIITNYLQNKFSNLMVGNMFFWFTFCILGQPMCVLLYYHDLMNRENKLDQS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05174 509 MobiDBLite consensus disorder prediction 1 69 - -
Trre15g05174 509 Pfam MBOAT, membrane-bound O-acyltransferase family 272 494 IPR004299 -
Trre15g05174 509 PIRSF Oat_dag 7 508 IPR027251 GO:0004144|GO:0019432
Trre15g05174 509 PIRSF Oat_ACAT_DAG_ARE 5 507 IPR014371 GO:0008374
Trre15g05174 509 MobiDBLite consensus disorder prediction 1 46 - -
Trre15g05174 509 PANTHER STEROL O-ACYLTRANSFERASE 49 503 IPR014371 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05174 Trre-Chr15 61277992 61285022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05174 80 506 Lipid Metabolism Gene Families AT2G19450 76.581 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05174 K11155 - gmx:732606 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g05174 15 61277992 61285022 Trre15g05174 15 61277992 61285022 ECH
Trre15g05174 15 61277992 61285022 Trre3g02403 3 23008863 23016885 PCT