Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02302 ATGTGGTTTTCGTTCTGGAGATCCAAAGATCGTTTTTCCTTGGATCAACTCAGGTACTTAGCTGATCAGTTGACAAAAGTTCAAATAGTTAATGATGTTAATAAGGATTTTGTTATTGAGGCTCTGAGATCAATCGCGGAGTTGATAACATATGGCGACCAACATGATCCAAGCTTTTTTGAATTTTTCATGGAAAAGCAAGTTGTGGGGGATTTTGTACGTATTCTAAAACTTAGCAAGACTATTAGCATTCCACTTCAGTTACTACAAACTGTTAGCATTATGATCCAAAATCTACAGAGTGAACATGCTATATACTATATGTTTAGTAATGAACATATGAACTACCTAATTACATATTCATTTGATTTCCGCAATGATGAGCTGTTGTCATACTACATATCTTTTTTAAGAGCAATAGGTGGAAAATTGAACAAGAATACTATTTCTCTGCTTGTGAAGACTCGCAATGACGAAGTAGTTTCATTTCCACTATATGTGGAGGCGATACGCTTTGCTTTTCATGAGGAGAACATGATTCGCGCTGCTGTACGTGCTGTAACCCTTAATGTTTATCATGTTGGAGATGACTCTGTTAATAGATATATAACTAGCGCACCTCACACAGATTACTTCTCAAATCTGGTTTCCTTTTTTAAGAAGCAGTGTATGGATTTAAACAGACTGGTCTCGGAGACACTGAAAAATCCAAGCCCAGATTCAAACTCTACCATTACTGCTGCTGTAGATGAAATTGAGGATAATTTATATTACTTCAGTGATGTGATCTCTGCCGGAATTCCGGATGTTGAAAGGTTAATAACAGATAGCATTCTGACACTTCTGATTTTTCCAGTACTTCTTCCTTCCCTGAGGATAGTGGCTGTTAATCATGTTGGCCAGGATATGCAAAGTGATGTTGTCACTTCTCTCTACTTACTTTGTTGCATCTTGAGGATAGTCAAGATCAAAGATTTGGCAAATACAATAGTTGCTGCACTTTATTACCCCTTAGAGTCCTTTACAAAATGTTCTGAGGGTCAAGTCAACGGCTATATACCTGAGCATGGTTTTAAATCTGAAAGCGATGGGACAGATAACGATAATCTTGCCAATAATAATAAAGAACGCTTGGTGGTCAATGTGCCATGCTCATCTAGTTCTTCAGATTTTCATCCACAAAGTATAACCATGCTAAATAATGGTAGCAGTTCGAATGGGTCTTTGAGGGAAGTTTTGCTTGAATATGTAACCGATGGCGCTGATGTACAAGTTTTGGGTTCCTTGAGTGTGCTTGCCACTCTGCTGCGAACTAAAGAACTTGATGAGTCAATGCTAGATGGGCTTGGAATTCTTCCACAACGCAAACAGCAAAAAAAGCTCCTATTGCAAGCTTTGGTTGGCTCGGCTTCGGGGGAAGAACAACTTTTTTCTTCTGAAAGTAGCTTGACAAGAGATGGCATTGCATGTGAGCTTGATGTTTATCTTGAAAAGATCAAGGAGCAGTATGGGGTATCTTTTCAGCCTCCAAATTTTGTATCAAGCCCTCGTGTACCTAGATTTCAGGTGCTCGATGCATTAGTGAGCCTCCTTTGTCGTTCTAATATATCTGCAGAGACACTATGGGATGGTGGTTGGCTTTTACGCCAGTTGCTTCCCTACAGTCAGTCAGAATTCAACAAGCATCACCTCAAAGTGCTGAAAACTTCATATGAGAATTCTGCTTGTGCTCTTGAAAAGGAAGTTAAAGGTTTCTGGCCTGACCTTCTTATTACTGTTCTCTGTGATGAGTGGAGAAAGTGCAAAAGAGCAATGGAATCCTCATCCCCTCCAAAAGAACCAAAGTCCATGCTTTTTCCACCTCGGAAGCTCTTTTCAGAAGAAGATATACTTGAGGGATCATCATTTACTGCTGGAGAAAGAATGCATGAGTTGGTGAAGGTATTTGTACTTCTTCACCAACTTCAAATATTCACTCATGGTAGAGCTTTGCCTGATCAACCTCTTATTTATCAACCTAGTGATCAGCGTACGAATTCTCGTGCCCAGACTTCTGGACTTGTGTCAGTCCCAAAGCCAGGCACTGAAATGAACCTTGGTAATGCTGTGCCTTGTCGAATTGCTTTTGAGAGGGGAAAAGAGCGCCATTTTTGGTTTCTAGCAATCTCTGTAGGAACATCTGGTTGGCTTGTACTCGCAGAAGAATTGCCTATGAAGAAGCCCTATGGAGTTGTTCGGGTTGCTGCACCTTTGGCTGGGTGCAATCCCAGGATTGATGATAAGCATTCAAAGTGGTTACACCTGCGGATCCGACCTTCCGCTTTACCTTTTCTGGATCCTGTCAAGTACAAACCCCATGGAAAGTTAAAGACAAAAGCTTTTGTTGATGGAAGATGGATATTGGCGTTCAGGGATGAGGAGTCTTGCAAAACTGCTTTTCTCATGATTCTTGAAGAGATTAATTATCTATGTGACGAGGTACATAGACGAATAAAACCTTTGCTCAAGCTTGGAACCGCACTAGACATATCAAACCTGTCTGATCCTATTTCAGAGGAATCCTCTTCACATACAACACCTCCCGATTCGTTGTAA 2595 0.4046 MWFSFWRSKDRFSLDQLRYLADQLTKVQIVNDVNKDFVIEALRSIAELITYGDQHDPSFFEFFMEKQVVGDFVRILKLSKTISIPLQLLQTVSIMIQNLQSEHAIYYMFSNEHMNYLITYSFDFRNDELLSYYISFLRAIGGKLNKNTISLLVKTRNDEVVSFPLYVEAIRFAFHEENMIRAAVRAVTLNVYHVGDDSVNRYITSAPHTDYFSNLVSFFKKQCMDLNRLVSETLKNPSPDSNSTITAAVDEIEDNLYYFSDVISAGIPDVERLITDSILTLLIFPVLLPSLRIVAVNHVGQDMQSDVVTSLYLLCCILRIVKIKDLANTIVAALYYPLESFTKCSEGQVNGYIPEHGFKSESDGTDNDNLANNNKERLVVNVPCSSSSSDFHPQSITMLNNGSSSNGSLREVLLEYVTDGADVQVLGSLSVLATLLRTKELDESMLDGLGILPQRKQQKKLLLQALVGSASGEEQLFSSESSLTRDGIACELDVYLEKIKEQYGVSFQPPNFVSSPRVPRFQVLDALVSLLCRSNISAETLWDGGWLLRQLLPYSQSEFNKHHLKVLKTSYENSACALEKEVKGFWPDLLITVLCDEWRKCKRAMESSSPPKEPKSMLFPPRKLFSEEDILEGSSFTAGERMHELVKVFVLLHQLQIFTHGRALPDQPLIYQPSDQRTNSRAQTSGLVSVPKPGTEMNLGNAVPCRIAFERGKERHFWFLAISVGTSGWLVLAEELPMKKPYGVVRVAAPLAGCNPRIDDKHSKWLHLRIRPSALPFLDPVKYKPHGKLKTKAFVDGRWILAFRDEESCKTAFLMILEEINYLCDEVHRRIKPLLKLGTALDISNLSDPISEESSSHTTPPDSL 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02302 864 MobiDBLite consensus disorder prediction 674 693 - -
Trre3g02302 864 MobiDBLite consensus disorder prediction 674 691 - -
Trre3g02302 864 PANTHER UNCHARACTERIZED 1 842 IPR039272 -
Trre3g02302 864 Pfam Uncharacterised conserved protein 42 192 IPR019155 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02302 Trre-Chr3 21186879 21201360 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02302 K19513 - gmx:100786267 1353.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02302 3 21186879 21201360 Trre3g02302 3 21186879 21201360 ECH
Trre15g05242 15 61744289 61753253 Trre3g02302 3 21186879 21201360 PCT