Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02238 ATGGGGGGTTGTTTTTCTTCAAGATCATCATCTACATCAAAGAAAATTAGATTGGTTCATCTAAGTGGTTATGTAGAGGATTTTGAGCAACCAATTTCAGTTAACCAAGTAATCACTAGTAGAAATCCACCAACTCACTTTGTTTGTACCTCTCTTCAACTTCTATCATCTTGTTCAAAACCATTGAAAGGTGATGCACAACTTCAGCCAGGAAATGTTTACTTCATGTTACCTTATTCAATTCTACAAGCCGATGTTTCGCCCGTTGATTTGGCTTCGCTTGCGAAAAGGCTCACCGCAAAGGCGAAAACTAGTAAATTAGATGGCAACAAGTCATTGAAAACTACTAATCCTTTGATAAATAATCAAGGTTTGAGTAATGTTTGGAGTTCGCCTTCGAGGAGTCCCGGAAGAGTTGCGGTGGCTGAACAATTCGCTATGAGGTATGGAGGACAAAGTAGCACGAGTAGAGCGCGGCTATGGAGACCTCTCTTGGATACTATTAGAGAAAAGTCATTCAATAGAAGTAATGAATCAGATTTGAGAGATATTCTTTGA 558 0.3925 MGGCFSSRSSSTSKKIRLVHLSGYVEDFEQPISVNQVITSRNPPTHFVCTSLQLLSSCSKPLKGDAQLQPGNVYFMLPYSILQADVSPVDLASLAKRLTAKAKTSKLDGNKSLKTTNPLINNQGLSNVWSSPSRSPGRVAVAEQFAMRYGGQSSTSRARLWRPLLDTIREKSFNRSNESDLRDIL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02238 185 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 170 - -
Trre3g02238 185 Pfam PADRE domain 1 170 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02238 Trre-Chr3 20537853 20538410 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02238 - - gmx:100810460 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02238 3 20537853 20538410 Trre3g02238 3 20537853 20538410 ECH
Trre15g05256 15 61931930 61932481 Trre3g02238 3 20537853 20538410 PCT