Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05256 ATGGGAGTTTGTTATTCTTGCAACACACCTTCTATAAGGAAAAATAATATCAGAATAATTCACCTCAACGGTTTTGTAGAAGAATTCGATCAACCAATTTCAGCAAACCAAATTATTGGAAGCCCACCAAAACACTTTGTTTGTACCTCAATTCAGCTACTTTCTTCATCCTCAATACCATTGTTAAAAGGAGATAGTCAACTCCAACCTGGTCAACTATATTTCATGCTACCATACTCAATACTTCAAGATGGTTTTTCTCCTTTAGATTTGGCTTGCTTAGCAAAAAGGCTCACTGCAAAAGCCAAGGCAAAACCATGTGATTACAATAAGTCTCCAATATCTACTCCTTTATTGAATCAAACAGTTTTTTGGAATTCTCCTTCAAGGAGTCCTTGTAGAGTTGTTGTGGAAGAGAAAACTATGATGAATAATGGAGGAAGAAGTCCTTGTAGAATGCAGTCATGGAAACCTATCTTGGAAAGTATTGCAGAGAAATCACTTAACAGAAGAAGTGAATCAGATTTGCAAGAATTAATTATTAATGTTTAG 552 0.3514 MGVCYSCNTPSIRKNNIRIIHLNGFVEEFDQPISANQIIGSPPKHFVCTSIQLLSSSSIPLLKGDSQLQPGQLYFMLPYSILQDGFSPLDLACLAKRLTAKAKAKPCDYNKSPISTPLLNQTVFWNSPSRSPCRVVVEEKTMMNNGGRSPCRMQSWKPILESIAEKSLNRRSESDLQELIINV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05256 183 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 165 - -
Trre15g05256 183 Pfam PADRE domain 1 165 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05256 Trre-Chr15 61931930 61932481 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05256 - - cam:101506348 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g05256 15 61931930 61932481 Trre15g05256 15 61931930 61932481 ECH
Trre15g05256 15 61931930 61932481 Trre3g02238 3 20537853 20538410 PCT