Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02201 ATGGGATGTTCACAATCGAAGTTAGATGATGAAGAGTCGGTTCAGCTTTGTAAAGATCGAAAGAGGTTTATCAAACAAGCTGTTGAGCAAAGGACTCGGTTTGCAACTGGTCATATAGCTTACATTGAATCTATGAGAAGAGTTTCGGCTGCTCTTCGTGATTATATTGAAGGTGATGAGCCTCGTGAGTTCTCATTAGATTCGGTTATTACACCGCCTTTTACGCCTGTGAAGAAGAGAACTAACCGTAGCATTGGCAATGGCAATGTTAATCGTAATGGTAATGGCAATGACTTTATTCCTATATCCGCAAAATCTTTCACACCATCGAGTATTGAGTTTGGAGTTGGATCGAATTCTACTTTGAGAATGAATTACTATAGGCCGAGTGGTAATCCGGTAATTTCGGTTGAGGAAAGAGCTCCATCACCTGAAACCATTCGAATGGAAACGTATTCACCAATGCAGCAGCATTATGGTATGGATGGTTATTTTACAATGCAATCACCGCCTATGAATCCTTCGATTTTTCCTTATTCTCCTCCTAATGTTAGGTCTAATATCCCTCCACCTTCACCTCAAAATGCCCAATGGGATTTCTTTTGGAACCCCTTTTCGTCGTTTGATTACTATGGTTATCCAAGCCGAAGTAGCCTTGATCAAACTGGTATCGATGATGAATATCGAGAACTAAGACAGGTTCGAGAAGAAGAGGGAATACCTGACCTTGAAGAAGATGAAACTGAACAAGAAGATTATGTTAGGAAGAGAAATGTCGTAGAAGAAAGAACTAGAAATGTAGTTGAGGGAAGAACTAGAAATGTAGTCGAAGAAAGAACTAGAAATGTAGTTGAAGGAAGAACTAGAAATGTAGTCGAAGAAAGAACTAGAAATGTAGTTGAAGGAAGAACTAGAAATGTAGTCGAAGAAAGAACTAGAAATGTAGTTGAAGAAAGAACTAGAAATGATGTAAATTTCTCCAAAGAAGAAGTTGTTGTTGAAGATATTGATGACAATGATGATGAGGAAGAGGAGGATGATGAAGAAGAGTGTGAAGAAGAGGGAACAGATGATGAAACTGAAACCGAAACCGAGCATGATGTCGAAGATTCTCAACAACCTCATGGCAGTGCGAGTTTTGAAGTATCGAAAAATCAAGCGGCAGGTCATATTGAATCCAGCCATAGAGAAATGTCAATTGGTAAACAAGAATCTAAGGAAGAGATGGCAGGTTTTACCGTTTACGTTAACCGAAGGCCAACCAGCATGGCCGAAGTGATCAAAGATCTTGAAGCTCAGTTCAAAACTGTGTGCAATGCAGCTAGTGATGTCTCAATTTTGTTAGAGTCGAAGAAAGCTCAGTATTTATTAACATCTCATGAACATTCAGCATCGAAATTATTGAACCCTGTCGCTATGTTCCGGTCAGCTTCTTCGCGCTCATCTTCGTCAAGATTTTTAGCGAATTCTTCAAGCACTAGGATGGAAAGTTATGAGGGCACCAAGGATATCTCTGATGAACATTGTAGGCTTTCTGGTAGTCATCAATCTACATTGGACAAATTGAATGCATGGGAGAAAAAGCTCTACGACGAAGTCAAGTCCGGAGAACGAATCCGAATAGCATATGAGAAAAAATGCAAGCAACTAAGCAACTATGAAGTAAAAGGAGAGGACCCTTCTGCAGATAAAACAAGAGCAGCCATTAGGGATCTAGATACTCAGATAACAGTTTCAATACACTCGGTTGAAGCTATTTCCCGGAGAATCGAAACTCTAAGGGACGAAGAGTTGCATCCCCAACTTCTTGACTTAGTACAAGGGCTTGAAAAGATGTGGAAAGTGATGGCAGAATGTCATCAAACACAGAAAAGAACCTTAGATGAGGCGAAGATTCTTCTAGCCGGCACACCTTCTAAATTACATTCCAGAAGACAACAACACTCTTCCGTCTCAATGACCGATCCAAATAGGCTGGCACGATCAGCCTCAAATCTCGAAACCGAGTTACGAAACTGGCGAAACACCTTTGAGTCATGGATCACTTCTCAAAGATCCTATATTCAAGCACTAACCGGATGGCTTCTCCGGTGCGTGAGATCCGAATCCGACGATGTATCAAAGTCACCGTGCTCACCTCATAGGTTGAGCAACACTCATCCGTTATTTGGACTCATTGTTCAGTGGTCGAGGCGTTTAGATGCCATACGCGAAAAAGCAGTTCTTGACGGAATGGACTTTTTTGCAGCCGGGATGGGATCACTCTATGCACATCAATTAAGACAAGATTCAAGGCCGAATTCATATGCACCAAAGCAAAGCGGCGATAACATGGAATTAGTGGAAGTTGGTCATATGGAAGAAGAGGTAATGGCTCCTGAAAAACTTGCTGAAGTTGCTATTAAAGTGCTTTGTGCTGGAATGTCTGTTGCTATAAGCTCATTAGCTGATTTTGCTTTTGATTCTGCTGAGGCATATAGTGAAGTTGTCAAGCAATGGGAGAGTGTGAAGAATCAAAAGCATAATTCTAGTGAAACTAGAACATAG 2547 0.4095 MGCSQSKLDDEESVQLCKDRKRFIKQAVEQRTRFATGHIAYIESMRRVSAALRDYIEGDEPREFSLDSVITPPFTPVKKRTNRSIGNGNVNRNGNGNDFIPISAKSFTPSSIEFGVGSNSTLRMNYYRPSGNPVISVEERAPSPETIRMETYSPMQQHYGMDGYFTMQSPPMNPSIFPYSPPNVRSNIPPPSPQNAQWDFFWNPFSSFDYYGYPSRSSLDQTGIDDEYRELRQVREEEGIPDLEEDETEQEDYVRKRNVVEERTRNVVEGRTRNVVEERTRNVVEGRTRNVVEERTRNVVEGRTRNVVEERTRNVVEERTRNDVNFSKEEVVVEDIDDNDDEEEEDDEEECEEEGTDDETETETEHDVEDSQQPHGSASFEVSKNQAAGHIESSHREMSIGKQESKEEMAGFTVYVNRRPTSMAEVIKDLEAQFKTVCNAASDVSILLESKKAQYLLTSHEHSASKLLNPVAMFRSASSRSSSSRFLANSSSTRMESYEGTKDISDEHCRLSGSHQSTLDKLNAWEKKLYDEVKSGERIRIAYEKKCKQLSNYEVKGEDPSADKTRAAIRDLDTQITVSIHSVEAISRRIETLRDEELHPQLLDLVQGLEKMWKVMAECHQTQKRTLDEAKILLAGTPSKLHSRRQQHSSVSMTDPNRLARSASNLETELRNWRNTFESWITSQRSYIQALTGWLLRCVRSESDDVSKSPCSPHRLSNTHPLFGLIVQWSRRLDAIREKAVLDGMDFFAAGMGSLYAHQLRQDSRPNSYAPKQSGDNMELVEVGHMEEEVMAPEKLAEVAIKVLCAGMSVAISSLADFAFDSAEAYSEVVKQWESVKNQKHNSSETRT 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02201 848 MobiDBLite consensus disorder prediction 333 366 - -
Trre3g02201 848 MobiDBLite consensus disorder prediction 373 389 - -
Trre3g02201 848 MobiDBLite consensus disorder prediction 326 406 - -
Trre3g02201 848 PANTHER UNCHARACTERIZED 1 834 - -
Trre3g02201 848 Pfam Protein of unknown function (DUF632) 423 752 IPR006867 -
Trre3g02201 848 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02201 Trre-Chr3 19860981 19864339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02201 509 838 Acyl Lipid Metabolism Gene Families AT2G27090 33.033 8.05e-47 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02201 - - tpra:123884976 1379.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02201 3 19860981 19864339 Trre3g02201 3 19860981 19864339 ECH
Trre15g05261 15 61995402 61998381 Trre3g02201 3 19860981 19864339 PCT