Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05261 ATGGGATGTTCTCAATCAAAGTTAGATAATGAAGAAGCAGTTAAGATTTGTAAAGATAGAAAAAGATTCATAAAAGAAGCTGTTCATCATAGAATTCAATTTGCAAATGGACATATAGCTTATATTCACTCTCTTAAAAGGGTATCTTCTGCTTTGCTTGATTATTTTGAAGGAGATCAGGCACTTCAATTCTCGTTGGATTCATTTATTCCGATATCGAAAGATTCGACTGTTCCAACAAAAATTGAGATTGGACCTAATACTACAACTTTGAAAGTGAATTATTTAAGGCCAAGTGGTAATCCACCGATTTCAGTTGAAGAAAAGCCTCCATCGCCGGAAACGGTTCGAGTTGAGTCTTATTCTCCTATACACCAATATGGTGTTGATGGTTTTTTTGGTATGCAGTCCTCACCTATGAATGCGTCGATTTTCGCTTATTCTCCGAATAACAGGCCTATTATCCCTCCGCCTTCACCTCAATGGGATTCCTTTTGGAATCCATTTACATCATTGGACTATTATGGTTATCCTAATGGAAGTAGTAGCCTTGACCAGATTCTTATGGATGATGAAAACCGAGAACTGAGGCACTTCCGAGAAGAAGAAGGAATACCAGACCTGGAACAGGAAGAAGAAGGTTTTGTTGCAAAGAAAAATGTAGAGGTAGAAAAAACCAAAATTGATGCAAACACTTCCAAAGAAGAAGTCACAGTTGAAGATGTTGATGAACATGAGGAGGTAAAGAAGGAAGTGAAAGAGGAGCGAACGGATGCTGAAACCGAAACTGCACATGAAATATCAGACTCACAAGTCGATGGCAGTGAGTGTTTTCAAGTATCGAAAGCTCAAACTTCCGGTCATATGGAATCCAGCCATCAAGAAATGGCAATTGATAATCAAGAAGCTAAGGAAGAAACACCTGGTTTTACTGTTTATGTAAACCAAAGACCGGCAAATATCGGAGAAGTGATAAGGGATCTTGAAGCTCAATTCACATTTGTTTGCAGTGCAGCCAATGATGTCTCGGCATTGTTAGAGGCCAAGAAAGCTCAATATTCGTCCACTTCTAATGAACTTTCAGCATCAAAATTGTTGAATCCAGTAGCTCTTTTTCGCTCAGCTTCTTCTCGCTCGTCCCCGTCGAAAATTATAACAAATTTTTCTAACACTAGGGATGACGTTTATGATGATCCTTCAGAGGAACATTGTGTGTTTTCTGTTAGTCACCAGTCAACATTAGACAGGTTATATGCATGGGAGAAGAAGCTCTATCAGGAAGTCAAGTCTGGAACACGTGTTCGACTTGCGTATGAGAAGAAATGTCTGCAACTGAAGAACCATGATATAAAAGGAGAGGAACCCTCTTCTGTGGATAAAATCAGAGCAACCATTAGAGATCTACGTACACAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCCAAGAGAATTGAAACTTTAAGGGATGAAGAGTTGCATCCCCAGCTTCTTGAATTGGTGCTAGGGCTAGCGAAGATGTGGAAAGTGATGGCAGAATGCCATCAGACGCAGAAACAAATCATGGAAGAAGCCAACATTCTTCTAGCCAGCAGCATTGATGCCAGAAAACAGTCTGCCATGTCAATAACTGATCCACACAGGCTCGCACGTTCAGTATCCAATCTTGAAACTGAGTTGAGGAACTGGCGAAACACATTTGAGTCATGGATCACTTCTCAAAGATCCTACATTCATGCACTAACCGGCTGGCTTCTCCGATGCATGAGATGCGAACCTGATGCATCAAAGTTAGTATGCTCTCCTCGAAAGTCTAGCTGCACTCATCCATTGTTCGGACTTTGTATTCAGTGGTCAAGGTGTCTAGATTCCGTACAAGAAACAGCAGTGCTTGATGGTATGGACTCTTTTGCAGCTGGCTTAGGATCCTTCTATGAAAAACAGCTAAGAGAAGATTCAGCACAAAATGCAATAGTTGGAAACAATGGGAATATGGAAATGGTGGAAGTTGGTAAAGTAGGAGGAGAAGAAGTGGTGGAGGTTGCTGTTAAGGTACTTTGTGGTGGAATGTCAAATGCTATGAGCTCAATGGCAGAGTTTGCTATTGATTATGCTAAGGGATACAATGACCTTGTTAAACAATGGGAGAATGTTAACTTGCAGCAAAATTGTGAGGCTGCAGAATGA 2190 0.405 MGCSQSKLDNEEAVKICKDRKRFIKEAVHHRIQFANGHIAYIHSLKRVSSALLDYFEGDQALQFSLDSFIPISKDSTVPTKIEIGPNTTTLKVNYLRPSGNPPISVEEKPPSPETVRVESYSPIHQYGVDGFFGMQSSPMNASIFAYSPNNRPIIPPPSPQWDSFWNPFTSLDYYGYPNGSSSLDQILMDDENRELRHFREEEGIPDLEQEEEGFVAKKNVEVEKTKIDANTSKEEVTVEDVDEHEEVKKEVKEERTDAETETAHEISDSQVDGSECFQVSKAQTSGHMESSHQEMAIDNQEAKEETPGFTVYVNQRPANIGEVIRDLEAQFTFVCSAANDVSALLEAKKAQYSSTSNELSASKLLNPVALFRSASSRSSPSKIITNFSNTRDDVYDDPSEEHCVFSVSHQSTLDRLYAWEKKLYQEVKSGTRVRLAYEKKCLQLKNHDIKGEEPSSVDKIRATIRDLRTQITVSIHSVEAISKRIETLRDEELHPQLLELVLGLAKMWKVMAECHQTQKQIMEEANILLASSIDARKQSAMSITDPHRLARSVSNLETELRNWRNTFESWITSQRSYIHALTGWLLRCMRCEPDASKLVCSPRKSSCTHPLFGLCIQWSRCLDSVQETAVLDGMDSFAAGLGSFYEKQLREDSAQNAIVGNNGNMEMVEVGKVGGEEVVEVAVKVLCGGMSNAMSSMAEFAIDYAKGYNDLVKQWENVNLQQNCEAAE 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05261 729 PANTHER UNCHARACTERIZED 1 716 - -
Trre15g05261 729 Coils Coil 718 729 - -
Trre15g05261 729 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Trre15g05261 729 Pfam Protein of unknown function (DUF632) 323 641 IPR006867 -
Trre15g05261 729 MobiDBLite consensus disorder prediction 250 269 - -
Trre15g05261 729 MobiDBLite consensus disorder prediction 250 302 - -
Trre15g05261 729 Coils Coil 242 262 - -
Trre15g05261 729 MobiDBLite consensus disorder prediction 270 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05261 Trre-Chr15 61995402 61998381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g05261 404 649 Acyl Lipid Metabolism Gene Families AT2G27090 37.903 5.28e-47 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05261 - - gmx:100818631 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g05261 15 61995402 61998381 Trre15g05261 15 61995402 61998381 ECH
Trre15g05261 15 61995402 61998381 Trre3g02201 3 19860981 19864339 PCT