Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01737 ATGGATGCACAACCAAAACCACCTTCAGTACAGCCTTTGAAATATCAGACATGGTTCTTGAAAGTTTCTATCCATTGTGAAGGTTGTAGAAAGAAAGTAAAGAAAGTTTTAAAGCGCATTGATGGTGTTTTCACTGCAACAATTGATTCACAACAACAAAAAGTAACAGTAACTGGAAATGTTGCTGTTGAGACCCTTTTAAGGAAGCTGGTTAAAGCAGGAAAACATGCCGAGATTTGGCCAGAGAATAACGACGGGAAGGGAAAAAGCTCCGGTGAAGAGAAGAAAAAGGATAAGAATGAACCAAAAGAGGCACAAAACTTGCAAAACAAGGGAACTGAAAGTGTTGCCAAAAAGTGTGAAAATGTTGCCAAAAACAAGAACAAAAAGTCAAAATCGGGCACCGGAGAGTTGCCGGAAAAGTCGCCGGCCGGAAACCATGTTGCTCCGGCGAGTGGTGGTGGTGGAGAGGGTTCTGATAAGAAGAAAAAGAAAAATGGGTGTGGTGGTGGTGGAAATGGAAGTAGTAATGGTTTGAGTACAGTAGCTAAGAGTGGACCAGCACACACTGGATTCCAATTTCAGAATCTTGGTCAGGGTATGGCCCACCAAATGAATCTCAGCCCTACACGTCAGCAATCATTCTTGTATTCATCAGAAACAGGGTACCCTCCAATGGTTTATGTGTCATCAGCTTACAATAGATTATATCCTATGGGAAGAGTTTGTGATCCTTCTTATTATGTTCCATCTTCACCCTACACGTGTCCTAGTCTACTAGATCAATATCAATATGGTACTTATCAACTTCAATCAGGACCGTTGGTTCCTTTTGAGTATTTTAGTGATGAAAATGCTAATGGGTGTTCCATAATGTGA 879 0.4118 MDAQPKPPSVQPLKYQTWFLKVSIHCEGCRKKVKKVLKRIDGVFTATIDSQQQKVTVTGNVAVETLLRKLVKAGKHAEIWPENNDGKGKSSGEEKKKDKNEPKEAQNLQNKGTESVAKKCENVAKNKNKKSKSGTGELPEKSPAGNHVAPASGGGGEGSDKKKKKNGCGGGGNGSSNGLSTVAKSGPAHTGFQFQNLGQGMAHQMNLSPTRQQSFLYSSETGYPPMVYVSSAYNRLYPMGRVCDPSYYVPSSPYTCPSLLDQYQYGTYQLQSGPLVPFEYFSDENANGCSIM 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01737 292 CDD HMA 20 78 IPR006121 GO:0046872
Trre3g01737 292 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 11 292 - -
Trre3g01737 292 FunFam Copper transport protein ATOX1 14 82 - -
Trre3g01737 292 SUPERFAMILY HMA, heavy metal-associated domain 14 81 IPR036163 GO:0046872
Trre3g01737 292 MobiDBLite consensus disorder prediction 78 105 - -
Trre3g01737 292 Gene3D - 14 79 - -
Trre3g01737 292 MobiDBLite consensus disorder prediction 78 194 - -
Trre3g01737 292 MobiDBLite consensus disorder prediction 118 136 - -
Trre3g01737 292 MobiDBLite consensus disorder prediction 170 194 - -
Trre3g01737 292 Pfam Heavy-metal-associated domain 22 76 IPR006121 GO:0046872
Trre3g01737 292 ProSiteProfiles Heavy-metal-associated domain profile. 15 78 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01737 Trre-Chr3 14120650 14122014 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01737 - - psat:127115794 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01737 3 14120650 14122014 Trre3g01737 3 14120650 14122014 ECH
Trre15g04830 15 58567437 58568919 Trre3g01737 3 14120650 14122014 PCT