Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01719 ATGGGTATGACAACTAGCAATCGAAAACGTTCTGAAGAATGCATGTCCGTCAATCACACTCTCTCTTCTCCACCATCATCAAATTACCACAGAAAAAGACCCAAATTCTCATCCGATTTTACCCGACCCGTTTCAATTTCACACGGCGTCGTTTCTAGAATCTCCCTTTACCCCGACGTTAAACCACCGTTCGTTCGTGAAGTTCACGCGCCTTGTAGACCTAAAAAATTCAACCTTGCTAGAAAATTATCCAGCTTCGTTTCCTGCACCAACAACAACAACAGTATCGATATCATGGGGAATTTTCTGGTGAGAAATTACGAAAAAGCCAAGCTTTCTGCATTGGGGAAATGTAGATTGGTGTCTAAGAAAGAGACTGTGGTGATTGATTTGGATGGAGGGGAGAGTAGTGGTCGTCGTTCCGATGATTCCGGTGTTGTCGAGGTTTTTGATGTTCGTGATTCCGATGCTAAAGTTGATGAATTGGATGATATGATTGTTGAAAATGATGTTCAACGGCGGTCATTGTCGTCGCCGGATTCTGCTTTGACTAAAGCTATTGTGAATTTGGAGGAACATGATTTTTCTAGTGTTCATGTGTATAAGAAGTTGCTTGAAGGTGTCCAGAGAAGAACTGATACAATTCAGAGTTTGAATTTTGAAATTGAACTCAATGAGAAGAGGAGAGATACTTTTCAATTGTTGCGTCCTAAGAAGGAAATTGTTGAGGAAGTTCCGTATGAGCCTTTTGTCCCTCTAACGGATGATGAAGAACATGAGGTTTCTCGCGCGTTTTCTTCCAACCGGAAGAAGATATTGGTTGCTCATGAGAGTTCTAATATTGAGATAGCGGGAGAAAAGATTCGGTGTCTTCTCCCGGGTGCATGGTTAAATGATGAGGTGATAAATTTGTATCTTGAGTTGCTGAAAGAGAGGGAGCAAAGAGAACCAAAGAAGTTTCTGAAATGTCATTTTTTCAACACCTTTTTCTACAAAAAGTTAATAAGTGGCAGGGATGGATATGATTTCAAATCTGTCCGAAGATGGACGACGCAAAGGAAACTGGGATACAGCCTATTTGATTGTGACAAAATATTTGTACCCATCCATCAAGAAATTCACTGGTGCCTTGCGGTTATTAATAAAAAAGATGCAAAATTCCAGTATCTTGACTCATTGAAAGGAAAGGATAACCGTGTGCTAAAAGTGCTGGCTAGATACTTTGTAGACGAAGTAAAGGACAAAACTGGAAAAGATATTGATGTAAGCACTTGGGATAAAGAATTTGTGGATGACCTTCCTGAGCAGGAAAATGGGTTTGACTGCGGCGTGTTTATGATCAAATATGCCGACTTTTATAGCAGAGGCCTAGGACTATGTTTTAACCAGGAACACATGCCTTACTTTCGGCGCAGAACAGCTAAAGAGATATTGAAATTGAGAGCTGACTAA 1452 0.4056 MGMTTSNRKRSEECMSVNHTLSSPPSSNYHRKRPKFSSDFTRPVSISHGVVSRISLYPDVKPPFVREVHAPCRPKKFNLARKLSSFVSCTNNNNSIDIMGNFLVRNYEKAKLSALGKCRLVSKKETVVIDLDGGESSGRRSDDSGVVEVFDVRDSDAKVDELDDMIVENDVQRRSLSSPDSALTKAIVNLEEHDFSSVHVYKKLLEGVQRRTDTIQSLNFEIELNEKRRDTFQLLRPKKEIVEEVPYEPFVPLTDDEEHEVSRAFSSNRKKILVAHESSNIEIAGEKIRCLLPGAWLNDEVINLYLELLKEREQREPKKFLKCHFFNTFFYKKLISGRDGYDFKSVRRWTTQRKLGYSLFDCDKIFVPIHQEIHWCLAVINKKDAKFQYLDSLKGKDNRVLKVLARYFVDEVKDKTGKDIDVSTWDKEFVDDLPEQENGFDCGVFMIKYADFYSRGLGLCFNQEHMPYFRRRTAKEILKLRAD 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01719 483 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 204 476 - -
Trre3g01719 483 FunFam Ubiquitin-like-specific protease ESD4 239 481 - -
Trre3g01719 483 MobiDBLite consensus disorder prediction 1 31 - -
Trre3g01719 483 SUPERFAMILY Cysteine proteinases 249 481 IPR038765 -
Trre3g01719 483 Pfam Ulp1 protease family, C-terminal catalytic domain 296 477 IPR003653 GO:0006508|GO:0008234
Trre3g01719 483 ProSiteProfiles Ubiquitin-like protease family profile. 281 453 IPR003653 GO:0006508|GO:0008234
Trre3g01719 483 MobiDBLite consensus disorder prediction 1 35 - -
Trre3g01719 483 Gene3D Adenoviral Proteinase; Chain A 250 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01719 Trre-Chr3 13978065 13985858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01719 K08592 - mnt:21406275 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04843 15 58656158 58661852 Trre3g01719 3 13978065 13985858 PCT