Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01608 ATGGGCGCAACGGAGAAATCGCAGACTAACGTTAATTCGTTACAGCGTGTCAAGGTCTACCGTCTGAATGATGATGGAAAATGGGATGACCAGGGCACTGGGCACGTCACTGTTGATTATTTGGAGCGATCTGAAGAGCTGGGTGTATTTGTTTATGACGAAGAAGACAACGAGACTATACTTTTGCATCGCATAATTTCTGATGATATTTACAGAAAACAAGAAGATACAATTATTTCATGGAGAGATCCAGAATATGCCACCGAACTGGCGCTCAGCTTTCAAGAACCTGGCGGATGCTCTTACATATGGGACCATATTTGCAACGTGCAAAGGAATATGCATTTTAATACTTTAAATAATGAGGCATTTCACAGTGTAAACAGTGAGTTGAGGGAGTTGCCTGCTGTTGAGTTATCGACGCTTCCGCTGATTCTTAAGACTGTGGTCGAGAGTGGCATTACGGATCAGTTGCGACTTACAGAGTTAATTTTAAATGATCAAGATTTTTTTCGGAAGCTCGTTGAAGTATTCAGAGTTTGTGAAGATTTGGAAAATACGGATGGCCTTCACATGATTTTCAAAATAATGAAAGGGATCATTTTGCTTAATAGTACACAAATTTTTGAGCGAATGTTCATTGATGAATTCATAATGGACATAATTGGTGCTCTTGAATATGATCCAGAGGTTCTAAATGTTCAACATCATCGTGAATTCTTAAAGGAGCATGTTGTTTTTAAGGAGGCCATACCGATAAAAAATTCAATTGTGTTATCAAAGATACATCAAACGTATAGAATTGGTTTTTTGAAGGATGTTGTTTTGGCCAGAATATTAGATGAGGCAACTGCTGCAAATCTCAACTCTATGATACATACAAACAACGCCACTGTTGTTTCTTTATTGAAAGATGACAGTACATTTATCCGGGAGTTGTTTGCTAGGTTCAAATCTCCCACTACCTCTCCCGAATCAAAGAAAAATATGATCCATTTCTTGCATGAGTTTTGTGGTTTAAGCAAGAGCTTACCGATGGTACAGCAGCTTCGACTTTTTAGGGATATGGTAAATGAGGGCATCTTTGACACTGTCACTGATGTCTTGCAAAGTCAAGACAAGAAGCTTGTGCTTACTGGAACAGATATTCTCATTCTCTTCTTGAATCAGGATCCTAATCTTCTCCGGTCTTATGTGGTTCGACAGGAAGGAGTCACACTTCTTGGACTGTTGGTTAAAGGAATGATAACAGATTTTGGTGATGACATGCATTGCCAGTTTCTTGAGATTCTTCGTATTCTGTTAGACTCATGCACATTGTCTGGCGCGCAGAGGGACACTATTATTGACATTTTCTACGAGAAGCATTTGGGTCAACTGATCAAAGTGATAACAGCATCATGTTCTCCAGAAAATGTCGCTAATGCGAGCAGCAAATTCACAGATCCTGACCAAGGAGACCAAAATCACAGTGGGACAAAGCCAGAGATTCTATTGAACATATGTGAATTACTATGCTTCTGTGTTCTGCACCACCCATACCGGATAAAGTGTAGTTTTCTTCTGAATAATGTGATTGATAAAATTTTGTTACTGACAAGAAGAGGAGAAAAATATCTGGTTGTAGGTGCTATTCGGTTTGTTCGTACCATTCTCTCACGTCATGATGAGCATCTGATAAATCATTTTGTGAGGAACAACCTTCTCAAACCCATTGTAGATGTCTTTGTTGCTAATGGCAGTCGCTACAATCTGCTCAATTCTGCTGTTCTCGAACTTTTTGAGTTTATTTGCAAGGAGCATATGAAAATATTGATAATATATATAGTTGATTCTTTCTGGGACCTGTTAGTGAAATTTGAGGATTTGGCTACCATTCATTTACTAAAAGTAAAATATGAGCAGTATTTGGATAATGATGGGGCAAAAGGCACTGTTACAAATGATCTTCGAAGACGACTTGAGGAACGGGCTTTAGAGAAAGAAGAGGAAGATTATTTTAATGAGGACAGTGATGATGAGGATTCAACCTCTACATCTATTTCACGTAATCAGAAAGAGCAGCAACAGCAGCAGCAGCGTGTGTTATCCAATGGAACTGCTGCGAGCCACTCAGATTTAAGTTCGAGGTCTGGTGGACTGGTTGACTATGATGATGATGAAGACGATGAAGATTACAAGCCACCCCCAAGGAAACAGCCAGAAACTTCTGAAGAGGATGAAGGCGCAATGGAGTCTCTAGGAATGAAAAGGAAGTTGCCTTTGAAGGAAAAGGAGATGGATCTCATACATAAGCAGAAGATGTCTAAAAGTTCAAAATCAAAAGATAGTGTTTTTGCTGCCTTATGTTCAACTTTGAGCCAGGCTGTACTACCTGGTAATAAAACTGCAATCAAGGATCATACTGGTCATTCGACAGTTGATGGGAAGATGAGCTCAACTGAAGACAATGAAGAAAAGGAGATAAATGTTTCAAAAAGCTGCTCCGAAAATAGCAACACAACAGCTGAAGTGAACCATGTAGAGAAAGAAACCGGTACACAAAACTTCTCTGATGGATCAAATGGCATTACTGATAATGGACAGTCAGGTGATGAGGAACATTCACTGGTTTCACCCAAATCCTCGCCAGAGATGGCCGTAAACGGTTCTTAA 2655 0.3959 MGATEKSQTNVNSLQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGVFVYDEEDNETILLHRIISDDIYRKQEDTIISWRDPEYATELALSFQEPGGCSYIWDHICNVQRNMHFNTLNNEAFHSVNSELRELPAVELSTLPLILKTVVESGITDQLRLTELILNDQDFFRKLVEVFRVCEDLENTDGLHMIFKIMKGIILLNSTQIFERMFIDEFIMDIIGALEYDPEVLNVQHHREFLKEHVVFKEAIPIKNSIVLSKIHQTYRIGFLKDVVLARILDEATAANLNSMIHTNNATVVSLLKDDSTFIRELFARFKSPTTSPESKKNMIHFLHEFCGLSKSLPMVQQLRLFRDMVNEGIFDTVTDVLQSQDKKLVLTGTDILILFLNQDPNLLRSYVVRQEGVTLLGLLVKGMITDFGDDMHCQFLEILRILLDSCTLSGAQRDTIIDIFYEKHLGQLIKVITASCSPENVANASSKFTDPDQGDQNHSGTKPEILLNICELLCFCVLHHPYRIKCSFLLNNVIDKILLLTRRGEKYLVVGAIRFVRTILSRHDEHLINHFVRNNLLKPIVDVFVANGSRYNLLNSAVLELFEFICKEHMKILIIYIVDSFWDLLVKFEDLATIHLLKVKYEQYLDNDGAKGTVTNDLRRRLEERALEKEEEDYFNEDSDDEDSTSTSISRNQKEQQQQQQRVLSNGTAASHSDLSSRSGGLVDYDDDEDDEDYKPPPRKQPETSEEDEGAMESLGMKRKLPLKEKEMDLIHKQKMSKSSKSKDSVFAALCSTLSQAVLPGNKTAIKDHTGHSTVDGKMSSTEDNEEKEINVSKSCSENSNTTAEVNHVEKETGTQNFSDGSNGITDNGQSGDEEHSLVSPKSSPEMAVNGS 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01608 884 Gene3D - 11 130 IPR011993 -
Trre3g01608 884 MobiDBLite consensus disorder prediction 661 775 - -
Trre3g01608 884 MobiDBLite consensus disorder prediction 796 884 - -
Trre3g01608 884 PANTHER ATP SYNTHASE GAMMA-RELATED 16 802 - -
Trre3g01608 884 Pfam Phosphatase 4 regulatory subunit 3 168 355 IPR006887 -
Trre3g01608 884 MobiDBLite consensus disorder prediction 725 772 - -
Trre3g01608 884 SUPERFAMILY PH domain-like 15 111 - -
Trre3g01608 884 Gene3D - 282 614 IPR011989 -
Trre3g01608 884 MobiDBLite consensus disorder prediction 826 884 - -
Trre3g01608 884 MobiDBLite consensus disorder prediction 801 825 - -
Trre3g01608 884 MobiDBLite consensus disorder prediction 681 710 - -
Trre3g01608 884 SUPERFAMILY ARM repeat 306 599 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01608 Trre-Chr3 12779322 12794311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01608 K17491 - gmx:100802657 1321.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01608 3 12779322 12794311 Trre3g01608 3 12779322 12794311 ECH
Trre15g04905 15 59182697 59199630 Trre3g01608 3 12779322 12794311 PCT