Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04905 ATGGGTGCGCCAGAGAAACCACAGACTAACGCTAATTCGATGCAGCGTGTCAAGGTGTACCGTCTTAATGATGATGGAAAATGGGATGACCAGGGTACTGGGCATGTAACTATTGATTATTTGGAGCGATCAGAGGATCTGGGCTTATTTGTTTATGATGAAGAAGACAATGAGTCCATACTTTTGCATCGTATCAGTTCCGATGATATTTATAGGAAGCAAGAAGATTCAATTATCTCATGGAGAGATCCAGAATATGCCACAGAACTGGCTCTTAGCTTTCAAGAGCCTAGTGGATGCTCTTACATATGGGACCATATTTGCAATGTGCAGAGGAATATGCATTTCAATACTTTGAATAATGAGCCATTTCAGAGCACTAATAGCGAGTTAAGGGAGTTGCCTGCTGTTGAACTAACAACACTACCTTTGATTCTTAAGACCATTGTTGACAGCAGCATTTCAGATCAAATACGAGTAACGGAGCTACTATCAAGTAATCAAGAATTTTTCCGGAAGCTGACGGAGTTATTTAGAATGTGTGAAGACTTGGAAAACATGGACTGCCTTCACACGATTTTCAAAATCGTCAAAGGGATCATTTTACTGAATAGTCCACCGATTCTTGAGAGAATTTTTAAGGACGAGTTTATAGTGGACATTATCGGTGCCCTTGAGTATGATCCAGAAAGTACTTGTGTTCAGCATCATCGTAAATTCTTAAAGGACCATGTTGTTTTTAAGGAGGCCATACCTATAAAAGATCCCAATGCACTGGCGAAGATACATCAGACGTATAGAGTTGGTTATTTGAAGGATGTTGTTTTGGCCAGAGTCTTAGATGACGCTACTTGTGCAACCATTAACTCCATAATACATGCAAACAATGCCTTTGTTATTGCTATGTTGAAGGACGACAATACATTTATCCAGGAGTTGTTTGCTAGGTTAAAATCATCCACCACCTCTCAAGAGTCAAAGAAGAACTTGGTCCATTTCTTGTACGAGTTTTGTAGTGTAAGCAAGAGCTTACAGATGGTCCAGCAGCTTCGGCTTTTTAGGGATCTAATGAATGAAGGCATCTTTGACATCATCAGTGATGTTCTGCAAAGTCAAGACAAAAAACTTGTGCTAACTGGAACAGACATCCTCCTTCTTTTTATGAATCAGGATCCTAATCTTCTGCGATCATATGTTGTTCGGCAGGAAGGAGTTGCTCTTCTAGGACTCTTGGTTAAGGGAATGGTAACAGATTTCGGAGAGAGCATGCATTGCCAGTTTCTGGAGATTCTTCGCATTCTATTGGACTCGAGTACGTTGTCTGGACCGCAGCGGGACACTATCATTGACATCTTCTTTGAGAAGCATTTGGGTCAACTGATTGAGGTTATCACAGCATCATGTCCTTCTGAAAATATTGCCGATGGAAGTATTAAATCAACAAGTCCTGGGCAAAGTGTTCAATTTCAGCGCAGAACAAAACCAGAGATATTATTAAACATATGTGAATTACTATACTTTTGTGTTCTTCATCACCCATACAGGATAAAGTGCAATTTCCTTGTCAATAGTGCAATTGAAAACATTTTGCTCCTGACACGGAGAGCAGAAAGATACTTAGTTGTCTGTGCTGTCCGGTTTGTTCGAACTATTCTCTCTCGCAATGATGAGCATATGCTAAATTATTTCATAAAGAATAACATTCTCAAACCAATCATAGATGCTTTTGTTGCTAACGGTAATCGTTACAATCTTCTTAACTCTGCTGTTCTGGAACTTTTTGAGTATATTCGGAAGGAGAATGATCTGAAATTATTGCTAAAACACCTAGTTGATTCTTATTGGGGTCAGCTGGTAAAATTTGAGCATTTGGCCTCAATTCACTCGCTGAAAGTAAAATATGAGCAGTGTGTGGATAATGGTGGGACTAATGGTGCTGCTGTAATGGACCTTCGAAGAAGAATTGATGAGCGTGCTGTAGAGAGAGAAGAAGAAGAACGCTATTTTAATGAGGACAGTGATGAGGATGATGTAGCGTCTGTATCTGTTTCACTTGATCATAAAGGTCATCAACAGCCTAGTCTTTCCAATGGAGTTACTTCAAACCACCCGCAGTCAAGTCGAAGGTCACTGGTTGACTATGAAGATGATGAGGACGATGAAGATTATAAACCACCACCAAAGAAGCAAAAAGAAGCATCAGAGGAAGATGAAGGGATACTGGAGTCTCTCAGGCTGAAAAGGAAACTTCCTTCAAAGGATAAGGATCCCGAACTTGTGAAGAAGCAGAAGTTAACAAAGAACTCAAAATCTAAAGATAGTGTTTTTGCTGCCTTGTGCTCAACACTGAGCCAAGCTGTGCTACCCAGTAAGAAATCTGTAATCAATATCCATACGGGTGCTCAAACAGTTGAAGGGAAGACGAGTTCTAGTGAAGACAATCAGGAAGACAGACAAAATGTTACTAGAAGCAGCTCTGATAATAGCAACACAGGAGCTGAAGACAACCTTGTAGAGAAAGATTCTTCAGCCTCTAGAAGCTTTTCTGATTGTTTGCCTGCAAAATCAGATAACATACAATTGGGAGGCGAGGAACGTCCGCTGGTTCCTCCTAAATCCTCGCCAGAGATGGCTGTAAATGGATCATAA 2649 0.4039 MGAPEKPQTNANSMQRVKVYRLNDDGKWDDQGTGHVTIDYLERSEDLGLFVYDEEDNESILLHRISSDDIYRKQEDSIISWRDPEYATELALSFQEPSGCSYIWDHICNVQRNMHFNTLNNEPFQSTNSELRELPAVELTTLPLILKTIVDSSISDQIRVTELLSSNQEFFRKLTELFRMCEDLENMDCLHTIFKIVKGIILLNSPPILERIFKDEFIVDIIGALEYDPESTCVQHHRKFLKDHVVFKEAIPIKDPNALAKIHQTYRVGYLKDVVLARVLDDATCATINSIIHANNAFVIAMLKDDNTFIQELFARLKSSTTSQESKKNLVHFLYEFCSVSKSLQMVQQLRLFRDLMNEGIFDIISDVLQSQDKKLVLTGTDILLLFMNQDPNLLRSYVVRQEGVALLGLLVKGMVTDFGESMHCQFLEILRILLDSSTLSGPQRDTIIDIFFEKHLGQLIEVITASCPSENIADGSIKSTSPGQSVQFQRRTKPEILLNICELLYFCVLHHPYRIKCNFLVNSAIENILLLTRRAERYLVVCAVRFVRTILSRNDEHMLNYFIKNNILKPIIDAFVANGNRYNLLNSAVLELFEYIRKENDLKLLLKHLVDSYWGQLVKFEHLASIHSLKVKYEQCVDNGGTNGAAVMDLRRRIDERAVEREEEERYFNEDSDEDDVASVSVSLDHKGHQQPSLSNGVTSNHPQSSRRSLVDYEDDEDDEDYKPPPKKQKEASEEDEGILESLRLKRKLPSKDKDPELVKKQKLTKNSKSKDSVFAALCSTLSQAVLPSKKSVINIHTGAQTVEGKTSSSEDNQEDRQNVTRSSSDNSNTGAEDNLVEKDSSASRSFSDCLPAKSDNIQLGGEERPLVPPKSSPEMAVNGS 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04905 882 Gene3D - 10 130 IPR011993 -
Trre15g04905 882 MobiDBLite consensus disorder prediction 799 882 - -
Trre15g04905 882 SUPERFAMILY ARM repeat 124 599 IPR016024 -
Trre15g04905 882 SUPERFAMILY PH domain-like 15 111 - -
Trre15g04905 882 PANTHER ATP SYNTHASE GAMMA-RELATED 16 799 - -
Trre15g04905 882 MobiDBLite consensus disorder prediction 821 854 - -
Trre15g04905 882 MobiDBLite consensus disorder prediction 685 708 - -
Trre15g04905 882 Pfam Phosphatase 4 regulatory subunit 3 167 356 IPR006887 -
Trre15g04905 882 MobiDBLite consensus disorder prediction 722 769 - -
Trre15g04905 882 MobiDBLite consensus disorder prediction 685 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04905 Trre-Chr15 59182697 59199630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04905 K17491 - gmx:100786790 1355.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04905 15 59182697 59199630 Trre15g04905 15 59182697 59199630 ECH
Trre15g04905 15 59182697 59199630 Trre3g01608 3 12779322 12794311 PCT