Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00618 ATGTCTAGCTTAATGCAAAACGACACCGTTCAAGCCTCTTCATCGTCGCGACCGGGTGGCGCCGATCAACAACCAACGGTGGTAGCTCCTTTGAGCCGCTATGAGTCACAAAAGAAACGTGATTGGAACACTTTTGGACAATATTTAAGGAACCAAACACCACCTGTTTCTTTGTCTCAGTGCAACTTCAACCATGTGCTTGAGTTTCTTCGTTACTTAGATCAATTTGGAAAGACTAAGGTTCACATGCACGGTTGCATCTTTTTCGGACAACCCGATCCGCCGGCACCTTGCACTTGTCCTTTGAGACAAGCTTGGGGAAGTCTTGATGCACTCATTGGACGGCTAAGAGCCGCTTACGAAGAACATGGTGGATCGCCGGAGAATAACCCGTTTGGTACCGGAGCTATTCGTGTTTACCTTCGTGAACTTCTTGAGATCCATGGGACACAAGAATGA 459 0.4749 MSSLMQNDTVQASSSSRPGGADQQPTVVAPLSRYESQKKRDWNTFGQYLRNQTPPVSLSQCNFNHVLEFLRYLDQFGKTKVHMHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPENNPFGTGAIRVYLRELLEIHGTQE 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00618 152 Pfam ALOG domain 29 144 IPR006936 -
Trre3g00618 152 ProSiteProfiles ALOG domain profile. 33 152 IPR006936 -
Trre3g00618 152 PANTHER PROTEIN G1-LIKE2 21 146 IPR040222 -
Trre3g00618 152 MobiDBLite consensus disorder prediction 1 33 - -
Trre3g00618 152 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00618 Trre-Chr3 4219853 4223684 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00618 - - qsu:112036029 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00618 3 4219853 4223684 Trre3g00618 3 4219853 4223684 ECH
Trre11g04204 11 54821706 54822218 Trre3g00618 3 4219853 4223684 ECH