Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04204 ATGTCTTCAAGTGGTAAAGATTTAGTAGAAGGAGGATCATCAACCTCTCAAGGGATCACACTTAGTCGATATGAATCTCAAAAGAGAAGAGATTGGAACACTTTTGGTCAATACTTAAACAATCTAAGACCACCAGTTCCACTTTCTCAGTGCAATTCCAATCATGTTTTGGAATTTCTTAGGTATTTAGATCAATTTGGAAAAACCAAAGTTCACTTACAAGGTTGTATATTTTATGGACAGCCGGAACCGCCGGCGCCATGTACATGTCCACTAAGACAAGCTTGGGGAAGCCTTGATGCTCTAATTGGGAGGTTAAGGGCTGCTTATGAGGAAAACGGTGGAACTCCAGAGACTAATCCTTTTGCGAGCGGTGCTATTCGTGTTTATCTTAGAGAGGTTAGGGAGTGTCAAGCTAAGGCTAGAGGTATCCCTTACAAGAAGAAAAAGAAGAGTACAAATAATCAAAACAAAGGAAATGATGGATCAAGCTCATCCATGCACTTTTCTTGA 513 0.4035 MSSSGKDLVEGGSSTSQGITLSRYESQKRRDWNTFGQYLNNLRPPVPLSQCNSNHVLEFLRYLDQFGKTKVHLQGCIFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGTPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKSTNNQNKGNDGSSSSMHFS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04204 170 MobiDBLite consensus disorder prediction 156 170 - -
Trre11g04204 170 MobiDBLite consensus disorder prediction 142 170 - -
Trre11g04204 170 Pfam ALOG domain 16 136 IPR006936 -
Trre11g04204 170 MobiDBLite consensus disorder prediction 1 22 - -
Trre11g04204 170 ProSiteProfiles ALOG domain profile. 23 150 IPR006936 -
Trre11g04204 170 PANTHER PROTEIN G1-LIKE2 16 158 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04204 Trre-Chr11 54821706 54822218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04204 - - gmx:100306225 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04204 11 54821706 54822218 Trre3g00618 3 4219853 4223684 ECH
Trre11g04204 11 54821706 54822218 Trre11g04204 11 54821706 54822218 ECH