Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05784 ATGGCACCTTTGATTCCCCTCTCTCTCTTATCTATTCTTCTTGTCCAATTTCCCTTCCAAATCATCTCAACCAACTCTGAAGGGAATGTTCTTCATGCTTTGAAGAAGAGACTTTCTGACCCCAACAACGTTCTTCAGAGCTGGGACCCAACTTTGGTTAATCCATGTACTTGGTTTCATGTTACATGTGACATCAACAACCATGTTACTCGTTTAGATTTGGGAAATGCTAATGTTTCTGGAACCTTGGGCTCAGAACTTGGCCACCTACGCCATCTGCAGTATCTGGAGTTGTATGGGAATGACTTAAGAGGAAAGATTCCTAAGGAACTTGGAAACTTGAAAGCACTTATTAGCATGGATTTGTATGATAACAAGTTGGAGGGGAAAATTCCAAAGTCATTTGGCAAGTTGAAGTCATTAAAATTCTTGCGGCTAAACAACAACAAGTTGACAGGATGTATCCCACGAGAACTCACTCGTCTCAAAAATCTCAAAATCTTTGATGTTTCTAACAACGAACTTTGTGGAACAATACCAGTAGATGGCAACTTTGGATCCTTTCCAATAAAGAGTTTTGAAAACAATAGACTAAGTGGTCCAGAGCTGAAAGGACTTGTTCCATACGATTTTGGATGCTGA 642 0.4003 MAPLIPLSLLSILLVQFPFQIISTNSEGNVLHALKKRLSDPNNVLQSWDPTLVNPCTWFHVTCDINNHVTRLDLGNANVSGTLGSELGHLRHLQYLELYGNDLRGKIPKELGNLKALISMDLYDNKLEGKIPKSFGKLKSLKFLRLNNNKLTGCIPRELTRLKNLKIFDVSNNELCGTIPVDGNFGSFPIKSFENNRLSGPELKGLVPYDFGC 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05784 213 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Trre1g05784 213 FunFam Somatic embryogenesis receptor kinase 1 23 208 - -
Trre1g05784 213 Pfam Leucine rich repeat 119 175 IPR001611 GO:0005515
Trre1g05784 213 Gene3D Ribonuclease Inhibitor 23 205 IPR032675 -
Trre1g05784 213 SUPERFAMILY L domain-like 25 201 - -
Trre1g05784 213 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05784 Trre-Chr1 62690435 62692732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05784 12 201 Receptor kinase-like Gene Family AT1G71830 58.115 4.82e-67 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05784 - - gmx:100816279 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05784 1 62690435 62692732 Trre1g05784 1 62690435 62692732 ECH
Trre9g00025 9 373575 374956 Trre1g05784 1 62690435 62692732 PCT