Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05473 ATGCATTCATCACACAACAAAAAAGAAGAAGTCACTAAAGTATGTCCACAAGGTTGTTGTCCAACCTTATTGTTCATCAATTCATCACAACAATCTCTCAATAACACAACCAAACCCAGAAACAGTTCTTCACAGTGTCGCCAAACCTTTGCAACAACAACATCTTCCTCAATTTTTCCAAACACCAAATTCACTAACCATGAATCTCTTCCATCACTTCATGAATCATTCACTGAATTCATGAATGTATATCCTCAATTCTCTGAGACTGAGAAAATTGACAGTTTAAGAGCCAAAGAATATTATCATCTTTCTTTCTTAAACCAATCTTGTCTTGATTATATTGGTATTGGTCTTTTTTCCTATTATCAACGCCAACAACATGATTCATCAAAAACTCAACTTTCTTCTTCTCCTTCAACTTCAACACCTTTTCAATCTCCACAACAATATTCTGATATACCCTTTTTTAGTAGTTCATATAAGACTGGAAATTTGAAGACTTTATTGCTTCATGGAGGGAAAGAATCAGAATTTGAGTCTGCAATGAGGAGAAGGATAATGAAGTTTCTTAACATTTCTGAAAATGATTATTTCATGGTTTTTACAGCTAATAGAACATCAGCTTTCAAACTTGTTGCAGATTCATATCCATTTCAATCGTGTAAGAAACTTTTGACAGTTTATGATTATGAGAGTGAAGCAGTGGAAGCAATGATTAGTTCTTCAGAAAAAAGAGGAGCTAAATCCATGTCAGCAGAATTTTCATGGCCAAGACTTAGAATTCAGTCAACAAAATTGAAGAAGATGATTGTTAGTGATAATAGTAATAAGAAGAAAAAGACAAAAAATGGTCTTTTTGTGTTTCCTCTTCATTCAAGAGTAACAGGAGCAAGGTATCCTTATCTATGGATGAGAACAGCACAAGAAAATGGATGGCATGTTTTGATTGATGCTTGTGCATTAGGACCAAAAGACATGGATAGTTTTGGTCTCTCTCTCTTTCAACCAGATTTTCTTATTTGTTCTTTCTACAAAGTTTTTGGAGAAAATCCATCTGGTTTTGGTTGCCTTTTTGTCAAGAAATCTTCTATTTCAATTCTTGAACCCTCCACTTGTGCAGGAATTGTGAATCTTGTACCAGAAAGTAGACTATTTAATCATCTATCAGAAGATTCTTCTAGTAACAATCAAGTAAAAGTTGATCAAAAATCACCATCTATCTTACAAGAACAAGAGTTATCTTCTTTGAGTTCTTTCTCTGGAAGGATGGAAACTCCACAATTTGTAAAAGTTGAAGGAGTTCAATCAGAGGAACTAAAAGCTCCTGAAGTTTGTGGAACTGTGGAGGAGAAAAGGGTAGTTGAGAAAAACCAAATTAAGAATGTGGAAGATAGTAAAAATGGAAGCTTTGACATTGAATGCAGGTGTTTGGATCAAGTGGACTCTTTAGGATTGACAAAGGTAACCAACAGAGGAAGGTACCTTATAAATTGGCTAGTGAACTCATTGATGAAGCTGAAGCATCCTAATGATGAAGGGGTTCCCTTAGTAAAGATATATGGTCCTAAGATAAGATTTGATAGAGGACCTGCTTTGGCTTTCAATGTTTATGATTGGAAAGGCGAAAAAGTAGAACCTGTTTTAGTACAGAAACTTGCTGATAGAAATAATATATCTCTCAGCTATGGATTTCTGCATCATATTTGGTTTGCAGATAAGTATTCAGAAGAGAAAGGGAGAGTCCTGCAGAGTAAAGAAGGGAGAGGCGAGAAAGTAACGGCGAATAAGAAGAAAGATAGAGATTGTTTGGGAGTGACAGTGGTTACTGCTGCATTAAGCTTCTTGGCTAATTTTGAAGATGTGTATAAACTTTGGACTTTTGTTGCTAGGTTCCTTGATGCAGATTTTGTGGAGAAGGAAAGGTGGAGGTACACTGCTCTTAATCAGAAAACAATTGAAGTTTAA 1968 0.3521 MHSSHNKKEEVTKVCPQGCCPTLLFINSSQQSLNNTTKPRNSSSQCRQTFATTTSSSIFPNTKFTNHESLPSLHESFTEFMNVYPQFSETEKIDSLRAKEYYHLSFLNQSCLDYIGIGLFSYYQRQQHDSSKTQLSSSPSTSTPFQSPQQYSDIPFFSSSYKTGNLKTLLLHGGKESEFESAMRRRIMKFLNISENDYFMVFTANRTSAFKLVADSYPFQSCKKLLTVYDYESEAVEAMISSSEKRGAKSMSAEFSWPRLRIQSTKLKKMIVSDNSNKKKKTKNGLFVFPLHSRVTGARYPYLWMRTAQENGWHVLIDACALGPKDMDSFGLSLFQPDFLICSFYKVFGENPSGFGCLFVKKSSISILEPSTCAGIVNLVPESRLFNHLSEDSSSNNQVKVDQKSPSILQEQELSSLSSFSGRMETPQFVKVEGVQSEELKAPEVCGTVEEKRVVEKNQIKNVEDSKNGSFDIECRCLDQVDSLGLTKVTNRGRYLINWLVNSLMKLKHPNDEGVPLVKIYGPKIRFDRGPALAFNVYDWKGEKVEPVLVQKLADRNNISLSYGFLHHIWFADKYSEEKGRVLQSKEGRGEKVTANKKKDRDCLGVTVVTAALSFLANFEDVYKLWTFVARFLDADFVEKERWRYTALNQKTIEV 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05473 655 SUPERFAMILY PLP-dependent transferases 179 377 IPR015424 -
Trre1g05473 655 MobiDBLite consensus disorder prediction 131 151 - -
Trre1g05473 655 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 74 615 - -
Trre1g05473 655 Gene3D - 167 399 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05473 Trre-Chr1 60239959 60241926 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05473 - - gmx:100820534 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01417 11 13851621 13853543 Trre1g05473 1 60239959 60241926 ECH
Trre1g05473 1 60239959 60241926 Trre1g05473 1 60239959 60241926 ECH
Trre11g01417 11 13851621 13853543 Trre1g05473 1 60239959 60241926 PCT