Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01417 ATGGATGATACCCTTAGCCAAAATGAAACCTCAAAAACATGTCCTGAATGTTGTTGCACAACTTCATTATTTTTCAACTCACCAAATTCAAAAAACACAAAAAAATTATCAAAACATTACAGAAATAGTTCATCTGAATGTCGTCACACTTTTGCATCATCAACAACATCCTTAATTTTTCCAAATACATATTTCACAAACCATGAATCTCTTCCATCTCTTCAAGAATCATTCATTGAATTCAACAAAGTTTATCCTCAATATTCTGAGACAGAACATGTTGACCATGTTAGAGCTAATGAATATTCTCACCTTTCATTTTCTAATCATACTTGTCTTGATTATCTTGGTATTGGTCTTTTTTCTTACTCTCAAATGCAAAAACATGTTCATGTTCATGATGATGATGATGATAATGATGATGATGTTACATCAAAAACCAAACATTCTTTACCTCAATTTACTGATATACCCTTCTTTAGCATATCTTGTAAAACAGGAAATTTGAAGACTTTACTTCTTCATGGTGGACAAGATTCCGAATTCGAGTCAGCAATGAGAAAAAGAATCATGAATTACCTTAACATATCGGAAACCGATTACTTCATGGTTTTTACAGCTAATAGAACTTCAGCTTTCAAACTTGTAGCAGATTGTTACCAATTTCAAAAAAGTAAAAAGCTTTTAACAGTTTATGACCACGAAAGCGAAGCAGTGGAAGCGATGATTAGTTCGTCAGAGAAACGAGGCGCAAAAGTTATGTCAGCCGAGTTTTCATGGCCAAGGTTAAGAATTCAGTCAACAAAGTTAAGGAAAATGATTGTGAGTAAAAGAAAGAAGAAGAAAAAAGAAGGTCTTTTTGTTTTGCCACTTCATTCAAGAGTAACAGGTGCAAGATATCCTTATATTTGGATTAGTATTGCACAAGAAAATGGTTGGAATGTTTTGGTTGATGCTTGTGCATTAGGACCAAAAGATATGGATTGTTTTGGTTTATCACTTTTTCAACCTGATTTTCTTATTTGTTCTTGCTATAAAGTTTTTGGTGAAAACCCTTCTGGATTTGGTTGCTTATTCATCAAGAAATCTGTTATTTCGACTTTGGAAACAAATTCTTCTGCAGGAATAGTTAATCTTGTTCAAGAAAAGACGCGACATGTTGAAGATTCTTTCGGTATAAAACAAAAATCGATACTTACTTTACATTTACATGAAGAAGAACCATTTTATATGACGTCTTTCTCCGATGAATTTGAAAAAGGAGAACCATCTGAGATAAAGATCGTATCGGCACATGAAGAGTTAAAACCGTCTCAAAGGTTTGAAATCGAGGAGTTGGAAAACCAAGGTGAAATTCATGAAAAGGGTGTTCAAGAAAGTGATAAAAATGAGAACTTTAATATTGAATGTAGGTGTTTAGATCAAGTTGATTCATTAGGAATTATATTGATTAATGATAGAGCAAGGTATTTGATTAATTGGTTGGTTAATTCAATGTTGAAGCTTAAGCATCCTAACACAGAAGGTGTTCCATTAGTGAAGATTTATGGTCCAAAAGTTAAATTTGATCGAGGACCGGCAATGGCGTTTAATATATTCGATTGGAAAGGCGAAAAAGTTGAGCCGGTTCTTGTTCAAAAACTCGCTGATCGAAGTAACATTTCTATAAGCTATGGATTATTGCATCATATATGGTTTGCAGATAAGTATGGAGATGAAAAGGGAAGAATTTTGAAGGATAAGAAAAAGAAAGATAGAGAAAAAGTTGGAATCACTGTTGTTACTATTGCATTAGGTTTTTTGGCTAATTTTGAAGATATTTATAAGCTTTGGTGTTTTGTTGCTAGGTTTCTTGATGCTGATTTTGTTGAGAAAGAGAGATGGAGATATATTGCTCTTAATCAGAAAACTGTTGAAGTTTAA 1923 0.3287 MDDTLSQNETSKTCPECCCTTSLFFNSPNSKNTKKLSKHYRNSSSECRHTFASSTTSLIFPNTYFTNHESLPSLQESFIEFNKVYPQYSETEHVDHVRANEYSHLSFSNHTCLDYLGIGLFSYSQMQKHVHVHDDDDDNDDDVTSKTKHSLPQFTDIPFFSISCKTGNLKTLLLHGGQDSEFESAMRKRIMNYLNISETDYFMVFTANRTSAFKLVADCYQFQKSKKLLTVYDHESEAVEAMISSSEKRGAKVMSAEFSWPRLRIQSTKLRKMIVSKRKKKKKEGLFVLPLHSRVTGARYPYIWISIAQENGWNVLVDACALGPKDMDCFGLSLFQPDFLICSCYKVFGENPSGFGCLFIKKSVISTLETNSSAGIVNLVQEKTRHVEDSFGIKQKSILTLHLHEEEPFYMTSFSDEFEKGEPSEIKIVSAHEELKPSQRFEIEELENQGEIHEKGVQESDKNENFNIECRCLDQVDSLGIILINDRARYLINWLVNSMLKLKHPNTEGVPLVKIYGPKVKFDRGPAMAFNIFDWKGEKVEPVLVQKLADRSNISISYGLLHHIWFADKYGDEKGRILKDKKKKDREKVGITVVTIALGFLANFEDIYKLWCFVARFLDADFVEKERWRYIALNQKTVEV 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01417 640 Gene3D - 174 437 IPR015421 GO:0003824
Trre11g01417 640 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 75 601 - -
Trre11g01417 640 Pfam Aminotransferase class-V 185 385 IPR000192 -
Trre11g01417 640 SUPERFAMILY PLP-dependent transferases 184 372 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01417 Trre-Chr11 13851621 13853543 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01417 - - aprc:113867925 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01417 11 13851621 13853543 Trre1g05473 1 60239959 60241926 ECH
Trre11g01417 11 13851621 13853543 Trre11g01417 11 13851621 13853543 ECH
Trre11g01417 11 13851621 13853543 Trre1g05473 1 60239959 60241926 PCT