Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05341 ATGAAGAAAGTTGTGTTGAAGTTGGATATACATGATGACAAAATCAAGCAAAAAGCTATGAAGACAGTCTCTGGCATTTCAGGGGTTGAGTCAGTTTCGGTGGATATGAAAGACCAGAAATTAACCTTAATCGGCGATATTGATCCGGTACGTGTGGTGGCAAAGCTAAGGAAGATTTGTCATGCAGACATAGTTTCAGTTGGACCAGCTAAAGAAGAAAAGAAAGATGATAAAAAGAAGGAAGATGATAAGAAGGATTCAACAAAAAAAGACATTGTGGTTAATCCTTTTATGTTCTATGGAACACAACCACATACTGCCTATTATAATCCTTATTACCGTGCTGTAAGCGTTGAAGAGGATCCTAATGGCTGTGTTATCATCTAA 387 0.3747 MKKVVLKLDIHDDKIKQKAMKTVSGISGVESVSVDMKDQKLTLIGDIDPVRVVAKLRKICHADIVSVGPAKEEKKDDKKKEDDKKDSTKKDIVVNPFMFYGTQPHTAYYNPYYRAVSVEEDPNGCVII 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05341 128 ProSiteProfiles Heavy-metal-associated domain profile. 1 67 IPR006121 GO:0046872
Trre1g05341 128 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 125 - -
Trre1g05341 128 SUPERFAMILY HMA, heavy metal-associated domain 1 59 IPR036163 GO:0046872
Trre1g05341 128 Gene3D - 1 73 - -
Trre1g05341 128 MobiDBLite consensus disorder prediction 68 87 - -
Trre1g05341 128 Pfam Heavy-metal-associated domain 9 59 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05341 Trre-Chr1 59252711 59253532 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05341 - - gmx:100306170 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05341 1 59252711 59253532 Trre1g05341 1 59252711 59253532 ECH
Trre11g01227 11 11801527 11802273 Trre1g05341 1 59252711 59253532 PCT