Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05242 ATGCCAGCGACGGACTATCAAGGTTCGTCTCCTTCATCGTTAACAAATTTTGGTCGTTCAATTCTTAGCTTTCGTCGTGAACAGGTTCATTCAATGGAAGGGTCAACCTTAGAGATTGAACTTGATTCTTTTCAACAACATGTTACTGATCGTTTTCTTGATCTATCTTCTGTTCCTCATGATGAATTGCTTTCACTCAAATGGGTTGGGAAGCTTTTGGATTGTTTTTTGATTTGTCAAGAGGAATTCAAAGCCATTCTTCATACTCATAAGGATTCGATTATGGCAGAAGCTTTTGGAGATTGTTCTTTATGCATTGGATCAACAAAGGAGTGTTGGTGA 342 0.383 MPATDYQGSSPSSLTNFGRSILSFRREQVHSMEGSTLEIELDSFQQHVTDRFLDLSSVPHDELLSLKWVGKLLDCFLICQEEFKAILHTHKDSIMAEAFGDCSLCIGSTKECW 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05242 113 Pfam Protein ROH1-like 2 95 IPR008511 -
Trre1g05242 113 PANTHER BPS1-LIKE PROTEIN 16 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05242 Trre-Chr1 58391311 58391756 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05242 - - gmx:100818059 151.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01010 11 9230157 9231290 Trre1g05242 1 58391311 58391756 PCT