Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01010 ATGCGTTCAACTTCAGAATTTCAAGGTTCTTCAATTCATAATCCACGTGGCACTCAAGTTCAATCAATGGAAAATTCAAGTTTAGAAAAAGAGCTTAATTTGTTTCAAAAACATGTAACTGATAGATTCAATGAACTATCTTCTGTTTCAAATGATGATTTGTTATCACTTTCTTGGGTTAGTAATCTTTTGGATACATTCCTTTGTTGTCAAGAGGAATTCAAGATGATTCTTCATAGCCATCGATCGATGGTGATTAATTCGCCTTTGGATCGATTGGTTAATGATTTTAATGAAAGGAGTGTGAAGGCATTGGATGTGTGTAATGCTATTAGAGATGGTGTTGAAATGGTTAAACAATGGGAGAAACAATTGGAGATTGTTGTTTGTGCTTTGGATCATAAAAGAATCATTAGTGAAGGTCAATTTCGTCGCGCGAAGAAAGCTCTTGTTGATTTAGCAATTGGTATGATTGATGATAATAGTAAAGATTCTAATAATGTTTCTTCATTTTCATATAGAAATAGATCATTTGGTAGAAACAATGTTAATAGAGGTTCATCTCAAGGAATTGGTCATTTTAGATCACTTTCTTGGAGTGTATCAAGGAATTGGTCAGCTACAAAACAACTACAAGCAATAGGGAACAATCTTTGTTTTCCTAAAAGTAATGATCTTGTTGCTACTAATGGTCTTGCATTGACTATTTATACAATGAGTTCAATTTTGTTGTTTACAATGTGGTCACTTGTGGCTGCAATTCCTTGTCAAGATAGGGGATTGAATGTCAACTTTACCATTCCGCGGCAGGTATTGTGGGCGGCTCCGGTTATGTCGCTCCACGAGCGGATTTCGGAGGAGTCGAAGAAGAGGGAGAGGAAGAATACTTGTGGACTTTTGAAGGAGATTCAGAAGATTGAGAAATGTGCTAGAGTGATGAATAATTTGGCTGATTCTTTGCACTTTCCTTTGAGTGAGGAGAAAGAAAAGGAGGTTAGGGTTAAAGTGCAAGATGTGGTGAATGTTTGTGAAGATTTGAAAGATGGATTGGATCCTTTGGAAAAACAAGTTAGAGAAGTATTTCATAGAATTGTTCGCGGTAGAATGGAAGGGCTTGATTCTCTTGGTAGATAG 1134 0.3624 MRSTSEFQGSSIHNPRGTQVQSMENSSLEKELNLFQKHVTDRFNELSSVSNDDLLSLSWVSNLLDTFLCCQEEFKMILHSHRSMVINSPLDRLVNDFNERSVKALDVCNAIRDGVEMVKQWEKQLEIVVCALDHKRIISEGQFRRAKKALVDLAIGMIDDNSKDSNNVSSFSYRNRSFGRNNVNRGSSQGIGHFRSLSWSVSRNWSATKQLQAIGNNLCFPKSNDLVATNGLALTIYTMSSILLFTMWSLVAAIPCQDRGLNVNFTIPRQVLWAAPVMSLHERISEESKKRERKNTCGLLKEIQKIEKCARVMNNLADSLHFPLSEEKEKEVRVKVQDVVNVCEDLKDGLDPLEKQVREVFHRIVRGRMEGLDSLGR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01010 377 Pfam Protein ROH1-like 6 375 IPR008511 -
Trre11g01010 377 PANTHER BPS1-LIKE PROTEIN 11 375 - -
Trre11g01010 377 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01010 Trre-Chr11 9230157 9231290 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01010 - - gmx:100806977 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01010 11 9230157 9231290 Trre11g01010 11 9230157 9231290 ECH
Trre11g01010 11 9230157 9231290 Trre1g05242 1 58391311 58391756 PCT