Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05191 ATGGCCATAAAGGCAATTGAATTATTGAAAGGTTGTGCATCCCAAGAAGAATTAATGGAAGTGATTACTGCGGTGGCTTCAGATTTAGGAGATGTAATCGATGATGTGAACACTTTGCAAGTGATTCCATTGAAAGGTGCAATGACCAATGAAGTTTTTCAGATAAATTGGCCAACAAAAAATGATGGTGATCTAAGAAAGGTTCTGGTTCGATTATATGGTGAAGGTGTTGAAATTTTCTTTGATAGGGATGAAGAAATTCGAACTTTTGAGTGTATCTCAAAACATGGTCAAGGTCCACGCCTTCTTGCTCGTTTCACTACTGGTCGTGTTGAAGAGTTTATTCATGCCAGAACTCTATCAGCTTCCGATCTCCGTGACCCCGAAATATCATCTCTGATAGCATCTAAGATGAGAGAATTCCATAAGCTTCATATGCCTGGTACAAAGAAGGCTCATATTTGGCAGAGAATGAGGAAATGGGTCGGTGAAGCCAAAAGTTTATGCTCCCCAAAGGAGACAAAAAATTTCGGATTGGACAATCTTGATGAAGAAATAAATATCCTCGAGAAGGAGTTATGCGAAGGATATCAAGAGATTGGTTTTTGTCACAATGATTTACAATATGGTAACATTATGATGGATGAAGAGACTAGATCAATCACTATAATTGACTACGAATATGCGAGTTACAATCCTATTGCGTATGACCTAGCAAATCATTTCTGTGAAATGGCAGCGGATTACCATAGCGATACACCTCATGTTCTTGACTATAGTAAATATCCTGAACTGGAGGAGCGTCAAAGGTTTATACGCACCTATCTAGGCTCTGAAGGCAAGAAACCAAGTAATGCTAAGGTGAACCAGTTAGTGATTGCCGTAGAAAAATACACTCTTGCAAACCATCTCTTTTGGGGCTTATGGGGACTTATTTCGAGTTACGTGAATAAAATCGACTTTGATTACAAAGAATATGCAAGGCAGAGGTTTCAGCAGTACCGGCTAACGAAGCCTACTTTATTGGAATCGCCAAGCATTGTTTCCCAAAACGAAACTGTGAATGGTTCGCTGCCACTAGCATCATGTGTGTGA 1095 0.3963 MAIKAIELLKGCASQEELMEVITAVASDLGDVIDDVNTLQVIPLKGAMTNEVFQINWPTKNDGDLRKVLVRLYGEGVEIFFDRDEEIRTFECISKHGQGPRLLARFTTGRVEEFIHARTLSASDLRDPEISSLIASKMREFHKLHMPGTKKAHIWQRMRKWVGEAKSLCSPKETKNFGLDNLDEEINILEKELCEGYQEIGFCHNDLQYGNIMMDEETRSITIIDYEYASYNPIAYDLANHFCEMAADYHSDTPHVLDYSKYPELEERQRFIRTYLGSEGKKPSNAKVNQLVIAVEKYTLANHLFWGLWGLISSYVNKIDFDYKEYARQRFQQYRLTKPTLLESPSIVSQNETVNGSLPLASCV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05191 364 CDD ETNK_euk 39 335 - -
Trre1g05191 364 Gene3D Phosphorylase Kinase; domain 1 37 114 - -
Trre1g05191 364 SUPERFAMILY Protein kinase-like (PK-like) 35 341 IPR011009 -
Trre1g05191 364 PANTHER CHOLINE/ETHANOALAMINE KINASE 15 344 - -
Trre1g05191 364 Gene3D - 74 334 - -
Trre1g05191 364 Pfam Choline/ethanolamine kinase 66 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05191 Trre-Chr1 58012632 58016010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05191 17 344 Acyl Lipid Metabolism Gene Families AT1G74320 67.378 1.03e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05191 K14156 - gmx:547866 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01118 11 10649925 10651226 Trre1g05191 1 58012632 58016010 PCT