Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01118 ATGTTGCGGGAGTTGTTATCAAAAGGACATCAAGAGATTGGTTTTTGTCACAACGATCTACAATACGGTAACATAATGATGGATGAAGACACAAGATCAATAACTTTAATTGACTACGAGTATTCGAGTTACAATCCTGTCGCATATGACCTTGCAAATCATTTCTGTGAAATGGCGGCAAATTACCACAGTGACACGCCTCATGTTCTTGACTACAGTAAATATCCTGATCTTGAGGAACGTCGAAGGTTTATTTATACATGCTTGAGTTCTGAAGGCAAAAAGCCAAGTGATGCTGAAGTGGAGCAGTTAGTGAATGTTGTAGAGAAGTACACTCTAGCAAACCATCTATTTTGGGGCTTATGGGGACTCATTTCAAGTTATGTCAATACAATTGATTTTGACTACAAAGAGTACTCAAGGCAAAGGTTTTAA 435 0.3816 MLRELLSKGHQEIGFCHNDLQYGNIMMDEDTRSITLIDYEYSSYNPVAYDLANHFCEMAANYHSDTPHVLDYSKYPDLEERRRFIYTCLSSEGKKPSDAEVEQLVNVVEKYTLANHLFWGLWGLISSYVNTIDFDYKEYSRQRF 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01118 144 SUPERFAMILY Protein kinase-like (PK-like) 2 144 IPR011009 -
Trre11g01118 144 Gene3D - 1 144 - -
Trre11g01118 144 Pfam Choline/ethanolamine kinase 2 79 - -
Trre11g01118 144 PANTHER CHOLINE/ETHANOALAMINE KINASE 2 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01118 Trre-Chr11 10649925 10651226 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01118 1 144 Acyl Lipid Metabolism Gene Families AT1G71697 70.139 6.51e-74 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01118 K14156 - gmx:547972 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01118 11 10649925 10651226 Trre11g01118 11 10649925 10651226 ECH
Trre11g01118 11 10649925 10651226 Trre1g05191 1 58012632 58016010 PCT