Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04859 ATGAAGAACCTTGGAAGTATTGGAAGTAGTGGAAGGTTTTCAACGGACGAGTGTGAAGATGAGGATGTTTCGAAGTTGGCCATTTCGACATTTCAAGCTAAGGAAGAAGAGATTGAGAGGAGAAAGATGGAGGTGAAAGAGAGAGTTGAACTTCAACTTGGACGCGCTGAAGAAGAGACAAGGCGTTTGGCACACATTTGGGAAGAACTTGAAGTTATGGAAGATCCGATGAGAAAGGAAGTTGCAATGGTACGAAAGAAGATTGACTTAGCTAACAAAGATTTAAAGCAACTCGGACAAAACTACCAGAAAAAGGAGAAAGAGTATAAAGAAGCCTTGGATGCTTTCAATGAAAAGAACAAAGAGAAGAATCATTTGGTAGCGACGCTAACTGAGATGCTGACAGAGAGTGAAAGAATGAGGATGAAGAAACTGGAGGAGCTATGCAAGACCATAGAGACTGTGTCACTAAAACAATAG 480 0.4104 MKNLGSIGSSGRFSTDECEDEDVSKLAISTFQAKEEEIERRKMEVKERVELQLGRAEEETRRLAHIWEELEVMEDPMRKEVAMVRKKIDLANKDLKQLGQNYQKKEKEYKEALDAFNEKNKEKNHLVATLTEMLTESERMRMKKLEELCKTIETVSLKQ 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04859 159 PANTHER RAB6-INTERACTING PROTEIN GORAB 13 154 IPR007033 -
Trre1g04859 159 MobiDBLite consensus disorder prediction 1 20 - -
Trre1g04859 159 Pfam Transcriptional activator 2 154 IPR007033 -
Trre1g04859 159 Coils Coil 28 48 - -
Trre1g04859 159 Coils Coil 81 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04859 Trre-Chr1 54733216 54734261 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04859 - - gmx:100794044 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04434 13 51896213 51897945 Trre1g04859 1 54733216 54734261 ECH
Trre1g04859 1 54733216 54734261 Trre1g04859 1 54733216 54734261 ECH