Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04662 ATGTTGCACAAATTTTCTTTGATGGCTTCTTATGGATTTCCTTCAGATTTTGGTTTGCAACAAGAATTTGTTGTCATGAAGGGTTGTCAACAATTGATGCCAAAATCAGAAATTATTAAGTGTCCTAATCTTAGGTTAAATTCATCTGAGGAATCAAGAATGAAATCAAAAGAATGGTTTGATTTAAATCAGTTTGTCAATTTTGATTTGTCAACTCTAAAGCCTATGGTTGTTGATGTACAAGCAACTTGTCCAAGCACAGTACTTTTCAGCTCTGGCATCGTTGATCAATGCACTGAGCATGAAAACACTTTACAGCGTATCACATCAGAGACTGTTGAAGCAGGTATAGGCGGTGTTCGTAAGGCTTTGCTGTCTGATTTGATGGGTTTGCAACTTTTAGGCATTGATACATCTCAATTACCATTACCACCTCTCGTCTACCCAAATAAGACATTCTACTTCTCGAAGCCTTTGCTTGATATTTTTCAAGATTCAGCCCTTCGTTCAAAAATTACAGTTCATCCAGATGGTCAAGTCACATTTATGGGTACAGAAATTGAGATGAAAGATCTTCTTGCCGTAGTTTCTGAATCATACTTAACAGAACGCACACATAAGGGCGAAAAACAGTCTATGCTTGTTCCTCACTTCAGTAGGCTGATTATAAATGAAGTAGAGGCCAGAAGTCATTCCTCCACATTGGATATTCACTCTATAGTGACTGTTCCTTTAAAAAGACCTGAGAAAGTCAAAGCAAAGCCTTCACAAAAAAAGAACAAGAAAGTAGACAGGGAGAGGGATCTCTTCAAGAAGAACTACGTTCATGCATGTGAGAGCCTTCTGTTCTTGATGGCTAATAAGAGGCATCATCGCGAAACAGCAATTCTTTCACTGAAGAAATCTGGCCCAGAGCTTTCCGAGCTCCTGACACAATTCTCAGCGGGCATTGCTGGTACTGGCCTTGCTGTTGTGCTATCTGTGATCTGCAAGCTAGCTTGCGGAAGGGTCCCATTTTGTGCATCTAAGGTCTTCAACACAGGGTTGGGTTTTGGGCTGGTTTGGCTTTCTTGGGGAGTAAATAAGCTGAGGGACACAATTGTTAACATAAACAAAAAGGCAGGAAAGACGGGATTGAAAGATAAGGAAATTATTCAAAAGGTGGATAAGAGCCTAAAAGAAGTTTACTTCAGAGCTGCAGCATTGCTAGTAGTGGCAATGCTAAAGCTTGCTTGA 1236 0.4005 MLHKFSLMASYGFPSDFGLQQEFVVMKGCQQLMPKSEIIKCPNLRLNSSEESRMKSKEWFDLNQFVNFDLSTLKPMVVDVQATCPSTVLFSSGIVDQCTEHENTLQRITSETVEAGIGGVRKALLSDLMGLQLLGIDTSQLPLPPLVYPNKTFYFSKPLLDIFQDSALRSKITVHPDGQVTFMGTEIEMKDLLAVVSESYLTERTHKGEKQSMLVPHFSRLIINEVEARSHSSTLDIHSIVTVPLKRPEKVKAKPSQKKNKKVDRERDLFKKNYVHACESLLFLMANKRHHRETAILSLKKSGPELSELLTQFSAGIAGTGLAVVLSVICKLACGRVPFCASKVFNTGLGFGLVWLSWGVNKLRDTIVNINKKAGKTGLKDKEIIQKVDKSLKEVYFRAAALLVVAMLKLA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04662 411 PANTHER OS05G0143300 PROTEIN 4 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04662 Trre-Chr1 52717662 52724128 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04662 - - gmx:100800200 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04662 1 52717662 52724128 Trre1g04662 1 52717662 52724128 ECH
Trre13g03748 13 45578758 45582096 Trre1g04662 1 52717662 52724128 PCT