Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03748 ATGGTGCAGAGACTCTGTCTTATGGCCTCTCATACCTACCCTCCAGGTCTTGCCTTCCCTACAACTCATCATATCAAGGATATGTTTAGCTTTAAGGGGAAAGGTGGGGACTCTCAAACGTTCTTGCCTTCTTCTTTAGCAAAACCAGACATGCTTAGTTATCAGTGTCCTTTTCTTAAGCCAAGTCCATCTGCAGAGTCGATGAAAACCCAAAATAAATGGTTTGATGACAATCAGTTTGTCAATGCTGATTTCTCAGCTCAATGGCCTGTATCAACTGATGTACAAGAATCTTGTTCAAATGCAGTACTTTTAGGCTTTGGCATTGTTGAACAATGCACCAAGCATGATAAAATTTCAAAGCAGCTAAAGTCCGGAACTGCTGAATCGCGCATAGATGGTGCAAATATATCTTTGATGTCAGACTTGATGAAATTGCAGTTGTCAGCAATTGACGAACCTCAACAACCATTTTCATTCGACTCATCATCTCTTTTATACCTTAATGACAAATTTGACATCCAGAAGCCTTTGTTGTATTTTCTTCAAGATTCAGCCCTTACTTCAAAGATTACAGTTCATTTAGATGGTCAAATCACATTTATGGGTACTAAGATTCAGATGAAAGATCTTCTTTCTGTAGTTGCTGAGTCATACTTGTCAAAGAGCTTACATAAGGGTGAAAAGCACTCAATGCTTGTTCCACATTTCAGCAGGGTGAACATCAATGAAGCAGGACTGAATCATTCCTCTACAGTGAAACAGACCTTAACTGCGCCTTTAAGGAGTCCAAAGAAAGTCAAAATCAAACCATCACAAAAGAAGAACAAGAAAATCGACAGAGAAAGAGATCTCTACAAGAACTATTCATATGCATGTGAGAGCCTTTTGTCCTTGATGGTGAACAAGAAAAAACGTCGGAAAACAATTATTCCTTCGCTGAAGAAATCAGGCCCTGAGCTTCCAGAGCTTCTTACACAAATTTCTGCTGGCATTGCTGGGACTGGTCTTGCTGTCCTATTATCGGTAATCTGTAAGCTAGCTTGTGGAAGGCTTATTCTTTCTGCATCAAGCTTGTTCAACACCGGATTGGGATTTGGGTTGGTTTGGCTTTCTTGTTCAGTAAGTAAGCTAAGGACCACAATTGTTAGCATCAGCAAACATGCTGCAAAGTTGGGTTTGAAAGAAGAGGAAATGATTCAGAAACTCGATAAGAGGATTAAAGATATTTACTTTGGCTCCGCCGCATTGCTAGCAGTGGCAGTGTTAAGTATTGGTTGA 1281 0.4005 MVQRLCLMASHTYPPGLAFPTTHHIKDMFSFKGKGGDSQTFLPSSLAKPDMLSYQCPFLKPSPSAESMKTQNKWFDDNQFVNADFSAQWPVSTDVQESCSNAVLLGFGIVEQCTKHDKISKQLKSGTAESRIDGANISLMSDLMKLQLSAIDEPQQPFSFDSSSLLYLNDKFDIQKPLLYFLQDSALTSKITVHLDGQITFMGTKIQMKDLLSVVAESYLSKSLHKGEKHSMLVPHFSRVNINEAGLNHSSTVKQTLTAPLRSPKKVKIKPSQKKNKKIDRERDLYKNYSYACESLLSLMVNKKKRRKTIIPSLKKSGPELPELLTQISAGIAGTGLAVLLSVICKLACGRLILSASSLFNTGLGFGLVWLSCSVSKLRTTIVSISKHAAKLGLKEEEMIQKLDKRIKDIYFGSAALLAVAVLSIG 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03748 426 PANTHER OS05G0143300 PROTEIN 3 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03748 Trre-Chr13 45578758 45582096 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03748 - - gmx:100777424 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03748 13 45578758 45582096 Trre13g03748 13 45578758 45582096 ECH
Trre13g03748 13 45578758 45582096 Trre1g04662 1 52717662 52724128 PCT