Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04658 ATGGCGGCTGGTCCAGCATCAACCACCACAACCACTACCGATCGACCTACCATTCCACCACCACCAACAACAACAACAACAACCGTTCCTCTTCAACCACCACCACCAATGCTAGTCTCTGATTCATTCGCTAAAGATGCTATTCTCGCTTGGTTTCGTGGCGAATTTGCTGCTGCTAATGCTATCATTGATGCTCTCTGTTCTCATCTCTCTCATCTTTCATCTTCCGCTGATTATACCAATGTTTTCGCCGCTATCCATCGTCGTAGACTCCATTGGATCCAAATCCTTCAGATGCAGAAATATCACTCCATTGCCGATGTCGCTCTTCAGCTCCGTTTGGTTGCTGAAAATAACAAAACTGTGCTTGAACAACAACATGTCATTGAAAACGACGTCGTTGCGGAGGAGCCAGAGGAGGAAGAACAGAAAACAGAGGAGAAACTGATCAATGGTGGTGGTGGTGATGAACACGAGGAGTATGATTCACCCGAGAGTGAGATCACTGATTCAGGATCTCAAGAAAACCAGACTAGTTCAATGAACATTGATATATGTTCCAATCATGAAGAATGTGAAGAACGTCCTTCACAGTTTAAGTTGACAAAAGGTTTCACAGCAAAGGAGTCAGTGAAGGGGCACATGGTGAATGTTGTGAAAGGGTTGAAGTTATATGAAGACGTTTTCACTGATTCAGAATTGTGCAAGCTGTCAGATTTTGTCAATGAGATCCATACTGCTGGTCAGAATGGGGAACTGTCTGGTGAAACTTTTATATTATTCAACAAACAGATAAAGGGTAACAAGAGAGAGCTGATTCAGCTGGGTGTTCCAATATTTGGACAGATAAAGGAGGACACAAAAAGTAATATAGAGCCAATTCCGGCAATTCTGCAACGTGTCATTGATCACTTTATTCAATGGCATTTACTTCCAGAGTACAAAAGACCAAATGGTTGTATCATCAACTTTTTTGAAGAGGGGGAGTTTTCTCAGCCATTCCTGAAACCACCACATCTGGATCAACCTGTGACCACTCTTCTTCTCTCAGAATCAACCATGGCTTTTGGGCGTATCCTTGTGAGTGAAAACGATGGGAACTACAAGGGACCACTCATGGTCTCATTGAAGCAGGGGTACATATCAAAGAACTTATTCTCTTTGCAGTCCTAA 1173 0.4305 MAAGPASTTTTTTDRPTIPPPPTTTTTTVPLQPPPPMLVSDSFAKDAILAWFRGEFAAANAIIDALCSHLSHLSSSADYTNVFAAIHRRRLHWIQILQMQKYHSIADVALQLRLVAENNKTVLEQQHVIENDVVAEEPEEEEQKTEEKLINGGGGDEHEEYDSPESEITDSGSQENQTSSMNIDICSNHEECEERPSQFKLTKGFTAKESVKGHMVNVVKGLKLYEDVFTDSELCKLSDFVNEIHTAGQNGELSGETFILFNKQIKGNKRELIQLGVPIFGQIKEDTKSNIEPIPAILQRVIDHFIQWHLLPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPVTTLLLSESTMAFGRILVSENDGNYKGPLMVSLKQGYISKNLFSLQS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04658 390 MobiDBLite consensus disorder prediction 15 35 - -
Trre1g04658 390 MobiDBLite consensus disorder prediction 133 179 - -
Trre1g04658 390 MobiDBLite consensus disorder prediction 144 159 - -
Trre1g04658 390 MobiDBLite consensus disorder prediction 1 35 - -
Trre1g04658 390 Gene3D - 205 381 IPR037151 -
Trre1g04658 390 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 44 379 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04658 Trre-Chr1 52663099 52666529 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04658 K10767 - gmx:100791586 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04658 1 52663099 52666529 Trre1g04658 1 52663099 52666529 ECH
Trre13g03737 13 45277305 45282445 Trre1g04658 1 52663099 52666529 PCT