Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04617 ATGACTGAAATTACTATGAAGAATCAATCTTCACAGCCACACTGGTGGTGGCTTGATGAAAACACCACCGTTAGAAGATCAACATGGCTTCAATCTACACTCACTGAGCTGAATGAGAAGACAAAGGCAATGTTAAAATTAATTGAAGGAGATGCAGATTCCTTCGCGCAACGAGCTGAGATGTTTTACAAGAAGAGACCAGAGCTTGTGAGCATGGTTGAAGATTTCTATAGGACACACCGCTTGTTAGCTGAACGGTATGATCAAGTCAGACCTGAATCCGGAATTCGCCTGCTCACCCCTTCCGCTTCATTTAAGCATTCTCAATCAGAGAAGTTGACGAGTTTTGATGATGATCGTGGTTATGATAGCTATTCTGAGAATTGTGATGTAGAGGAATCTGTGGAATCTGAAATTGATGATCCTGAGCACGAAGAGGAAGAACATGTGGAAGTTCGGTCTGTGGCTTTAAATGACGTGATGAAGCTGAGGAAGGAAATTGAGATACTTGGTGAAAAGAAGAAGGTTCATAAGGGTCAAATCAAGCAAAAAGATGACATACTTGAAGTAATGAAGTTGAGTGAAGAAATAGAACGATCCGAGAAAGAGAATGAAGCACATGAGAATGAACTCAAGCAGGAAAGTTCCATTTCTAATGAAGTAGTAAAGAAGTTGAGGGAAGAAATAGAACAAATGAAGCAGAAAGATAACATTCGCGATCAAGTAATGAAGTTGAGGGAAAAGATAGAACGACTCGAGAAAGAGAATGAAGCGCAGAAGGATGAACTCAGGCAGAAAGATACCATTTGCAATGAAGTAAAGAAATTGAGGGAAGAGATAGAACAACACAAGAAAAAGAATGAAGCACAGAAGGATGAACCTGAGCAGAAAGATACCATTTGCGATGAAGTAACGAAGTTGAGGGAAGAGATAGAACGACTCGAGAAAGAGAATGAAGCACAGAAGAATGAGCTCAAGCAGAAAGACGCTGCTTCTAATGAAGTAATGAACTTGAGGGAAAAGATAGAACAACTCGAGAAAGAGAATGAAGCACAGAAGAATGAACTCAAGCAGAAACACACTGTTTCTAATGAAGTAATGAAGTTGAGGGAAAAGATAGAAAAACTCGAGAAAAAGAATGAAGCACAGAAGGATGAACTCAAGCAGAAAGACATTGGTTCTAATGAAGTAATGAAATTGAAGGAAAAGATAGAGCGACTCGAGAAGGAGAATGAAGCACAGAAGGATGAACTCAAGCAGAAAAACACCATTTGTGATGAAGTAATGAAGTTGAAGGAAGAAATAGAACAACTCAAGAAAGAGAATGAGGCACAAAAGGTTGAACTCAAGCAGAAAGCTACAATTTGCAATGAAGTAATGAAGTTGAGGGAAGAATTAGAAACACACAAGAAAGATGAACTCAAGGAGAAAGATACCATTTGTGATGAAGTAATGAAGTTGAGGAAAGAGGTAGAACGACTCGAGAAAGAGAATGAAGCACAGAAGGATGAACTCAAGGAGAAACATATCATTTGCAATGAAGTACTGAAGTTAAGAGAAGCACAGAAGGATGAACTCATGCATAAACTTACCATTTATGATGAAGTAATGATGTTGAAGGAAGAGAGGGAGAGTTTTAGAGAAGAGAATAGGACACAGAAGGATGATCTAAAACAGAAAGACAAAGAGAAAATAGAGGTTATAAGACAGCTCAGTTCAACAATAGATTTGCTGAAGCAGGAGAATGTAAAGATGAGAAACTTCATAGCTAAGGAATATGCCAAAAAATGGAAGATACCATTTAAGTTCAACAAACTCATTGGAACATTCTCAGAGAAATTGCTTAATGGGATTCCAAAGAATAAGCCTAGTCTTGTAGCTCTCTAG 1887 0.3842 MTEITMKNQSSQPHWWWLDENTTVRRSTWLQSTLTELNEKTKAMLKLIEGDADSFAQRAEMFYKKRPELVSMVEDFYRTHRLLAERYDQVRPESGIRLLTPSASFKHSQSEKLTSFDDDRGYDSYSENCDVEESVESEIDDPEHEEEEHVEVRSVALNDVMKLRKEIEILGEKKKVHKGQIKQKDDILEVMKLSEEIERSEKENEAHENELKQESSISNEVVKKLREEIEQMKQKDNIRDQVMKLREKIERLEKENEAQKDELRQKDTICNEVKKLREEIEQHKKKNEAQKDEPEQKDTICDEVTKLREEIERLEKENEAQKNELKQKDAASNEVMNLREKIEQLEKENEAQKNELKQKHTVSNEVMKLREKIEKLEKKNEAQKDELKQKDIGSNEVMKLKEKIERLEKENEAQKDELKQKNTICDEVMKLKEEIEQLKKENEAQKVELKQKATICNEVMKLREELETHKKDELKEKDTICDEVMKLRKEVERLEKENEAQKDELKEKHIICNEVLKLREAQKDELMHKLTIYDEVMMLKEERESFREENRTQKDDLKQKDKEKIEVIRQLSSTIDLLKQENVKMRNFIAKEYAKKWKIPFKFNKLIGTFSEKLLNGIPKNKPSLVAL 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04617 628 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 12 94 IPR011684 GO:0003779
Trre1g04617 628 MobiDBLite consensus disorder prediction 315 334 - -
Trre1g04617 628 Pfam KIP1-like protein 15 88 IPR011684 GO:0003779
Trre1g04617 628 Coils Coil 536 563 - -
Trre1g04617 628 MobiDBLite consensus disorder prediction 281 302 - -
Trre1g04617 628 Coils Coil 477 511 - -
Trre1g04617 628 Coils Coil 297 472 - -
Trre1g04617 628 MobiDBLite consensus disorder prediction 197 216 - -
Trre1g04617 628 Coils Coil 190 293 - -
Trre1g04617 628 PANTHER PROTEIN NETWORKED 4A 5 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04617 Trre-Chr1 52252205 52255056 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04617 - - tpra:123919502 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04617 1 52252205 52255056 Trre1g04617 1 52252205 52255056 ECH
Trre13g04669 13 53836840 53839265 Trre1g04617 1 52252205 52255056 PCT