Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04669 ATGGGAAAGAATCAACGATCAAATTGGTGGTGGCTTGATAATAGTCCCACTAAAAACAAACGATCACCGTGGCTTCAGTCCACACTCTATGAGTTAAATGAAAAGACAAATGCGATGTTAAAGTTAATTGAAGAAGATGCAGATTCGTTTGCAAAACGTGCAGAGATGTATTACAAGAAACGACCCGAGCTTATTAGCATGGTTGAAGATTTCTATCGGACACACCGTTCGTTAGCCGAGCGGTATGATCAAGTCAAACCAGACACTGGACTCGGTCACATCTCGCCAGGGGTATCACCTTTTGCTTCAGCCAAGTATCGGATAGAGAAGCTAATGAGTTTTGCAGATACCGGTTATGATACCTATTCTGAGAATTTCGACGTAGATGAGTCTATGGAATCCGAAGTTGATGATCCTGAGCATGAAGAAAAAGAGGTGGCCAAATTTCACAGCTACACAAAAGAAGAGCAAGTTTCGTGCGTGGCTGTCAATGAAGAAGTGATGAAGCTGAGAGACGAAGTTAAGAGAGTAAGCGACGAGAACGAGGTTCATAAGGAGCAATTGAAACATAAAGATACAATTTGTGATGAAGCACTGAAGTTGAGGGAAGAAATAGAAAAACTAAGGGAAGAGAATGAGACACATAAGGAGCAACTGAAGCATAAGGATGAAGAGAAGATAGAAGTGATTAAACAACTGAGTTTAACAATAGATTTGTTGAAGCAAGATAATGTTATGATGAGAAGCTTTATTGCTAAAGAGTCTACTAAGAAATGGAAGTTTCCATTTGAGTTCAACAAACTTGGAGCATTTTCTGTGAAATTGTTTAATGGAAATCAAAGGAATCAGCCTAGTGTTGAGCTCTCTAGATGTGGTTTACATGGTCATCAAATAGCTTAG 900 0.3944 MGKNQRSNWWWLDNSPTKNKRSPWLQSTLYELNEKTNAMLKLIEEDADSFAKRAEMYYKKRPELISMVEDFYRTHRSLAERYDQVKPDTGLGHISPGVSPFASAKYRIEKLMSFADTGYDTYSENFDVDESMESEVDDPEHEEKEVAKFHSYTKEEQVSCVAVNEEVMKLRDEVKRVSDENEVHKEQLKHKDTICDEALKLREEIEKLREENETHKEQLKHKDEEKIEVIKQLSLTIDLLKQDNVMMRSFIAKESTKKWKFPFEFNKLGAFSVKLFNGNQRNQPSVELSRCGLHGHQIA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04669 299 Coils Coil 160 187 - -
Trre13g04669 299 PANTHER PROTEIN NETWORKED 4A 4 87 - -
Trre13g04669 299 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 7 89 IPR011684 GO:0003779
Trre13g04669 299 Coils Coil 191 225 - -
Trre13g04669 299 Pfam KIP1-like protein 9 83 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04669 Trre-Chr13 53836840 53839265 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04669 - - gmx:100815707 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04669 13 53836840 53839265 Trre13g04669 13 53836840 53839265 ECH
Trre13g04669 13 53836840 53839265 Trre1g04617 1 52252205 52255056 PCT