Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04542 ATGGCTCGTAACTTCAATAACATCAAGGCTTTTTCTGCTCTTGTTGCTGATGGATTGTCCAACCCTCTTACTAGACGAGGATATGCGGCGGCAGCGACACAAAACGCAACAAGAGGAGTAGCAATCTCCGTGAGCGGCAAGATAGTATCATCCAAATCAAGAGAAGACAAAGTGGCAAATGCTGGAAAGGTCACATGGGTCCCAGACCCCGTGACCGGTTACTACAAACCAGAGAACACCAATGAGGTTGATGTTGCTGACCTACGAGCCACAATTTTGGGAAAAAAGTAA 291 0.4674 MARNFNNIKAFSALVADGLSNPLTRRGYAAAATQNATRGVAISVSGKIVSSKSREDKVANAGKVTWVPDPVTGYYKPENTNEVDVADLRATILGKK 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04542 96 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 94 IPR004926 -
Trre1g04542 96 Pfam Late embryogenesis abundant protein 1 93 IPR004926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04542 Trre-Chr1 51481783 51482422 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04542 - - vun:114190398 127.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04750 13 54296533 54296938 Trre1g04542 1 51481783 51482422 PCT