Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04750 ATGGCTCGTTCTTTCGCTAACGCTAAGGTTTTTTCTGCTATTGTCCTTCAAGAATTCTCCAACACTCTCACAAGACGTGGTTTTGCTGCGGCAACAGAAAGTGCAACAAGAGGAGGAGTGGTGTCTATTGGCAACAAGATGGGACCTAAAAAGACAGGGGAAGATGTTGTTTCAACTTATAAGGTTTCTTGGGTACCAGATCCTGTTACTGGTTACTATAAACCTGAAAATATTAAGGATGTTGATGCTGCTGAATTGCGCGCTAAGCTTCTCCAAAAAAAACTTAACAACTAA 294 0.4116 MARSFANAKVFSAIVLQEFSNTLTRRGFAAATESATRGGVVSIGNKMGPKKTGEDVVSTYKVSWVPDPVTGYYKPENIKDVDAAELRAKLLQKKLNN 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04750 97 Pfam Late embryogenesis abundant protein 1 91 IPR004926 -
Trre13g04750 97 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 95 IPR004926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04750 Trre-Chr13 54296533 54296938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04750 - - gmx:100527032 131.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04750 13 54296533 54296938 Trre1g04542 1 51481783 51482422 PCT