Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04541 ATGACTAGCCCCGTCATCCTCCTCCTCCTCCTGACGGTGGCTCTAACCGTCTCCGCCACACCAACAGCCTACGAAGCTCTAACAACCTACAACTTCCCCGAAGGAATTCTCCCAAAAGAAGTAACCAATTACGAATTAGAAGAATCAAGTGGAAATTTCCGCGCCGATCTAAACGGTTCGTGCAGTTTCTCTTTAGAAGGTTCGTATCAATTGAGTTACAAATCAACCATCACAGGTCGTATATCAGAAAACAAACTCACCGATCTCAGGGGTATAAGCGTCAAAGTACTATTCTTCTGGGTTAACATTCTTGAGGTTGTTCGTAAAGGTGATGACCTTGATTTCTCTGTTGGTGTTGCCACTGCTTCTTTTCCGTTAGATAATTTCTTTGTTTCTCCACAGTGCGGTTGCGGTTTGGATTGTGATTATTTAAGAATAAGAAAACTTAAATTGAATACTAAAAACCCTTCTCTTTTATCCTCTGCTTAG 489 0.4192 MTSPVILLLLLTVALTVSATPTAYEALTTYNFPEGILPKEVTNYELEESSGNFRADLNGSCSFSLEGSYQLSYKSTITGRISENKLTDLRGISVKVLFFWVNILEVVRKGDDLDFSVGVATASFPLDNFFVSPQCGCGLDCDYLRIRKLKLNTKNPSLLSSA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04541 162 Pfam Protein of unknown function, DUF538 23 129 IPR007493 -
Trre1g04541 162 SUPERFAMILY At5g01610-like 6 141 IPR036758 -
Trre1g04541 162 Gene3D - 10 136 IPR036758 -
Trre1g04541 162 PANTHER T31J12.3 PROTEIN-RELATED 10 136 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04541 Trre-Chr1 51467182 51467670 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04541 - - gmx:100808207 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04541 1 51467182 51467670 Trre1g04541 1 51467182 51467670 ECH
Trre13g04755 13 54324577 54325490 Trre1g04541 1 51467182 51467670 ECH
Trre13g04755 13 54324577 54325490 Trre1g04541 1 51467182 51467670 PCT