Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04755 ATGATGATGAAGTCTTCAATCCTAATATTTCTTTCTATTTTAATCCACTTAACACTTTCACACTCATCAACCCAAAACCAAAATTTATCAGTCTATGAAACTCTTCAACAATATGATTTCCCAGTTGGTATTCTTCCACAAGGTGCAACAAGCTATGAACTAAACAAAAACACAGGAAAATTCACTGTCTATTTTGATGGAACATGCATCTTTGGTATAAAATCCTACGATCTCAAGTACAAATCTACAATTAAAGGATTTATATCTAAAGGTAAACTTACTAAGCTGAAGGGTATTAGTGTCAAAGTTGAATTGCTATGGCTTAAAATTGTGGAGGTTACTCGTCATGGTGATGATCTTCAATTCTCTGTTGGTATTGCTTCTGCTGAATTTAGTGTTGATAACTTTTTAGAGATTCCTCAGTGTGGTTGTGGATTTGATTGCAATGGTTTGAGTAATCATGTTTAG 468 0.3333 MMMKSSILIFLSILIHLTLSHSSTQNQNLSVYETLQQYDFPVGILPQGATSYELNKNTGKFTVYFDGTCIFGIKSYDLKYKSTIKGFISKGKLTKLKGISVKVELLWLKIVEVTRHGDDLQFSVGIASAEFSVDNFLEIPQCGCGFDCNGLSNHV 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04755 155 PANTHER T31J12.3 PROTEIN-RELATED 18 143 IPR007493 -
Trre13g04755 155 Gene3D - 16 142 IPR036758 -
Trre13g04755 155 SUPERFAMILY At5g01610-like 8 148 IPR036758 -
Trre13g04755 155 Pfam Protein of unknown function, DUF538 31 136 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04755 Trre-Chr13 54324577 54325490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04755 - - cam:101515317 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04755 13 54324577 54325490 Trre13g04755 13 54324577 54325490 ECH
Trre13g04755 13 54324577 54325490 Trre1g04541 1 51467182 51467670 ECH
Trre13g04755 13 54324577 54325490 Trre1g04541 1 51467182 51467670 PCT