Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04495 ATGTCAACTGAGAATCAGATACACGACGGTGCAGTTGTTGAAGAAGAAAGAAGACCTCTCCTTGACCATGATTTTGATTCCTCAATTCTTATTCTAACTGAAAATGGTGACAACACTATCTTCCCCCCTTTACCATCATCTGCTCCTAATCAACGCCTTGTTTCTCTCGATGTCTTCCGCGGCCTCACTGTTGCGTTAATGATATTAGTTGATGATGTGGGACGGGCTTTCCCATCATTGAATCATTCTCCATGGTTTGGGGTCACACTCGCTGATTTTGTAATGCCGTTTTTTCTTTTTGGTGTTGGCGTTTCGATCGGTCTGGTGTTCAAGAAAGTCTCTAGTAAACCAAATGCAACAAAAAAAGTAATATTGAGGACGATTAAGCTTTTTCTTTTGGGGCTCTTGCTACAAGGTGGGTATTTCCATGGGCGTGGTAATTTAACTTATGGACTTGATTTAAGTAAGATACGCTGGTTTGGTGTACTTCAGAGGATATCTATTGGATATTTCCTGGCTTCAATGTCGGAGATTTGGCTTGTGAACAGTAATATTTTGGTTGATTCACCAGCAGCTTTTGTCAGGAAATACTCCATCCAGTGGATCTTTTCTATCTTACTTTGCTCAGTATACCTTTGCTTGCTCTATGGCCTCTATGTTCCAAATTGGAAGTTCGGGCATTCTAACTTGCTTTGGTCTGGTCGTGTATCAACTATTCAAAATGTTCATTGTGAAATGAGGGGTAGCCTTGATCCTCCTTGTAATGCTGTGGGTTTTATTGATAGATTAATTCTTGGTGAAGATCATATGTACCAGCGTCCTGTCTACAGAAGAACAAAGGAGTGCAGTGTCAATTCTCCTGATTACGGACCGTTGCCTCCAGATTCACCTGGATGGTGCCTTGCACCATTTGACCCGGAGGGTATTTTGAGTTCACTGATGGCTGCCATTACTTGTTTCGTGGGATTGCAATTTGGACATATACTTGTTATTTTTCAGGTTCACAAGCAGAGGGTACTACTTTGGTCTGTGTTTTCCTTCTCTCTATTGGTAGTCGGATATATTCTGGATATTCTAGGAATTCCTTTATCAAAAGCACTCTACACATTAAGCTTCATGTTCATCACTGCAGGGGCATCGGGCTTGGTTTTGACTGCTATATACTACATTGTTGACATAGAACATCTCAGAAAGCCTACAGTTTTACTACAATGGATGGGAATGAATGCCCTTATTGTATATGCATTGGCTGCTTGTGACATTCTCCCAGCAATTATCCAGGGTTTCTATTGGCGTTCTCCTGAAAATAACTTGGTTGACGCTACTGAAGGTTTAATACAGAACGTATTACATTCCGAGAAGTGGGGTACACTGGCCTTTGTAATTATTGAGATTTTATTCTGGGGTCTTTTGGCTGGTATCCTCCACAAGAAAGGGATATATATAAAACTGTAA 1455 0.4096 MSTENQIHDGAVVEEERRPLLDHDFDSSILILTENGDNTIFPPLPSSAPNQRLVSLDVFRGLTVALMILVDDVGRAFPSLNHSPWFGVTLADFVMPFFLFGVGVSIGLVFKKVSSKPNATKKVILRTIKLFLLGLLLQGGYFHGRGNLTYGLDLSKIRWFGVLQRISIGYFLASMSEIWLVNSNILVDSPAAFVRKYSIQWIFSILLCSVYLCLLYGLYVPNWKFGHSNLLWSGRVSTIQNVHCEMRGSLDPPCNAVGFIDRLILGEDHMYQRPVYRRTKECSVNSPDYGPLPPDSPGWCLAPFDPEGILSSLMAAITCFVGLQFGHILVIFQVHKQRVLLWSVFSFSLLVVGYILDILGIPLSKALYTLSFMFITAGASGLVLTAIYYIVDIEHLRKPTVLLQWMGMNALIVYALAACDILPAIIQGFYWRSPENNLVDATEGLIQNVLHSEKWGTLAFVIIEILFWGLLAGILHKKGIYIKL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04495 484 PANTHER LD22376P 39 470 - -
Trre1g04495 484 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 52 176 IPR012429 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04495 Trre-Chr1 50866604 50871541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04495 K10532 - gmx:100802361 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04495 1 50866604 50871541 Trre1g04495 1 50866604 50871541 ECH
Trre13g04324 13 50878826 50882187 Trre1g04495 1 50866604 50871541 PCT