Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04492 ATGGAGTCAAAGGTTGAGAAAGCTATGATTAACTTTAATCCAGAATCTAAAACAACCCTTGTTGATCATAATCCTCAACCCAATCCCATTCTCAACAAGGGACCATCAAAAAGATCCAAGAATTTTTTTAAGGTTGCATTATTAATGATGCGAGGGCATTCTCGTAAATCAACAAAAACGGTTTTTTCCGTTGATGATGAGTCAAAAAGCATATGGAGGAAGATTGTGGGGTCCATGAGACCTATGCATCTTCAAAGCGATCAATCTCCACCGCAAATTATCAATGGTGAGAATAATCTTAAAAAAGTAATCATTGAAAAAAATATTAATGTTGATATTCAGAGTGAGGATGGGTTTGATTATGGATCGGTGTCTTCGTTACCGCTATCTCCAGATAGTAGCCAATATGCTTCGGCGACTAATAGCCTTTACGCTTCGGCGGTAGGGCTAAATGAAATGGTTGAGGAGGAGAAAGAGGAAGAGATTGTGAATAAGGATGATATTGTTGGTGATGGTGATGACATGATTGATGCTAAAGCTGAAGAGTTTATTGCTCAATTTTATCAAGATATGAGGTTGCAGCGCATGGATATTGTGGATCATCGTTACAATGAAATAAGTATGAGGTCATTGGGAATATGA 642 0.3769 MESKVEKAMINFNPESKTTLVDHNPQPNPILNKGPSKRSKNFFKVALLMMRGHSRKSTKTVFSVDDESKSIWRKIVGSMRPMHLQSDQSPPQIINGENNLKKVIIEKNINVDIQSEDGFDYGSVSSLPLSPDSSQYASATNSLYASAVGLNEMVEEEKEEEIVNKDDIVGDGDDMIDAKAEEFIAQFYQDMRLQRMDIVDHRYNEISMRSLGI 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04492 213 PANTHER COTTON FIBER PROTEIN 1 208 - -
Trre1g04492 213 Pfam Cotton fibre expressed protein 173 206 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04492 Trre-Chr1 50855325 50855966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04492 - - mtr:11419999 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04795 13 54601089 54601799 Trre1g04492 1 50855325 50855966 PCT