Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04795 ATGGAGCCAGACATTGAAATTTCTAACATCAACACCATTTCTAACCCTCCTCAAGATGATGATGAATCAAAACCAAAACAGATTCTCACCAGAAAGAAGAAGAGTGGTCCAATTAATGTTGTTAGGGTGGCACTTCTCATGATGCGAGGAAGTAGTCCTAAAAAATCAAGCGTGACTCCTAAGAAATCAAACGTGACGGACAATGAATCGAAGAACGTTTGGAGCAAATTTGTTGGGTCAATTAGACCATTACATCTTCAAGGTAGCCGATCCCCGCAATCATTTAGTGGCCGGAAATTCGATCAATTGATCACTCTGCCGCTTTCTCCTTCTTCGTCTGAATCTACCGGTGGTGCTAGCGTGTTTACGGCAGAGGAGGAGCCTTTTTCGCCATTGCAAAAGTCACCATCGAATAGCCGTTATGCCTCGGCTGTAGGATTGAACGACCTCGTGCAAAGTGTTGCGAATAGCCCTTACGCTTCGGCAATAGGATTGAATGAGCTCGTGTCGAGTGATGAGGAGAATGAGAGACAGGAAGAGATTGAGGAGGAGGAGGAGGAGGAGGTGGCGGTTCGTGGAAATGGGGATGAGACGATTGATGCTAAAGCCGAGGAGTTTATTGCTCAATTCTATCAACAAATGAGGTTGCAACGATTGAATAATGTGGATCGTCATTATCAAGAGCGAAGTGAAAGGTCATTAGGATTTTAA 711 0.4459 MEPDIEISNINTISNPPQDDDESKPKQILTRKKKSGPINVVRVALLMMRGSSPKKSSVTPKKSNVTDNESKNVWSKFVGSIRPLHLQGSRSPQSFSGRKFDQLITLPLSPSSSESTGGASVFTAEEEPFSPLQKSPSNSRYASAVGLNDLVQSVANSPYASAIGLNELVSSDEENERQEEIEEEEEEEVAVRGNGDETIDAKAEEFIAQFYQQMRLQRLNNVDRHYQERSERSLGF 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04795 236 MobiDBLite consensus disorder prediction 52 70 - -
Trre13g04795 236 MobiDBLite consensus disorder prediction 169 197 - -
Trre13g04795 236 Coils Coil 168 188 - -
Trre13g04795 236 MobiDBLite consensus disorder prediction 48 70 - -
Trre13g04795 236 MobiDBLite consensus disorder prediction 107 137 - -
Trre13g04795 236 Pfam Cotton fibre expressed protein 196 230 IPR008480 -
Trre13g04795 236 MobiDBLite consensus disorder prediction 173 191 - -
Trre13g04795 236 PANTHER COTTON FIBER PROTEIN 1 153 - -
Trre13g04795 236 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04795 Trre-Chr13 54601089 54601799 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04795 - - cam:101496512 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04795 13 54601089 54601799 Trre1g04492 1 50855325 50855966 PCT