Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04472 ATGGCTGTCACTACTCCCTATCAAAATGTCACAGAAAAGAAACACTGGTGGCTCACAAATCGCATGATTGTTGAGAAATATATCAAAGATGCAAGAACTCTCATTGCATCACAAGAACGTAACGAGATTGTTTCAGCTCTTAGTCTTTTAGACGCAGCTTTAACTATATCTCCAAGTTCAGATCAAGCTCTTGAACTAAAAGCTAGATCTTTACTTTATCTAAGAAAATTCAAAGATGTAGCTAATATGCTTCAAGATTACATTCCAAGTTTGAAAATGGCAAATGATGATTCAAGCTCTGTTTCTTCAGATGGTTCTTCTCAACAACTTTCAAGAGAAGGGGTTAAGTTACTTTCTTCATCGGATTCTTCTGTTACAGATCAGAGTTTCATCAAATGTTTCTCTGTTTCTGATTTGAAAAAACGTGTCATGGCTGGTCTCTGTAAAACTGGTGATAATCAAGGATATTGGAGATACTTGGTTTTGGGGAAAGCATGTTGTCACTTAGGTCTAATGGAAGATGCAATGGTTCTTCTTCAAACTGGAAAACGTCTTGCCAGTGCCGCATTCCGCCGCGAAAGTGTTTGCTGGTCCGACGACAGTTTCTCTCTATGGAACACACCATTCTCCGGCGATGATGCCGTTTCAAAGCCACCTGCAACAACACCACCAAAAAGTCCTTTAACAGAATCTGAAACCGTAAACCAACTCTTAGCACACATAAAATTCCTCCTCCGTCGACGCGCAGCCGCAATTGCCGCCATGGACGCCGGACTTCACTCAGAAGCCATTCGCCACTTCTCGAAAATTGTCGATAGCCGCCGCGGCGCTCCGCAAGGCTTCCTCGCCGAATGTTACATGCATAGAGCCACTGCGAATCGTTCTGCAGGAAGAATCGCTGATTCAATTGCTGATTGTAACAGAACATTATCACTGGATCCTACATGTATTCAAGCACTTGAATCTAGAGCTTCAATTCTAGAAACAATTCGTTGCTATCAAGATTGTCTTCATGATCTCGAACATTTGAAACTCTTATACAACACAATTCTCCGTGATCGGAAACTTGCCGGTCCGTTATGGAAGCGTCACAATGTACGTTATAATGAAATTCCTGGAAAACTCTGCACATTAACAGCCAAAATTCAACAGCTGAAACAAAAGGTTTCTTCCGGCGAAAATTTGCGGAATGTGGACTTTTACGGTTTGATCGGACTGCGACGCGGTTGCGGTCGATCGGAGTTGCAGAGAGCTCATCTTTTGCTTTGTTTGAAGCATAAACCAGAGAAGGCCACATGTTTTATCGAACGGTGTGAACTCGCCGATGAACGTGATATTGAATCGGTTAAAGATAGAGCGAGAATGGCTTGTATGTTGTTGTATAGGTTGCTTCAAAAAGGTTACACAAATGTTATGAATTCTATTGCGGAAGAAGAAAATGCTGAGAAGCAGAAGAAATTGGTTTTACAGTTACAACAAACTGAACAGAAATTGGTTCTAAATGCAAATTCAAATGCAAATGCAAATTCAATTGCAAATGTTAATGCAAATGCAAATGTGAATTCAGTTGTTGTTCAAGTGATGCAAAAGAAGAAAAATAGAGATGAAATGGAGGATAAGTTTGCAATGTCTTCACCTAGTATTGCGAATCCAACGGTGTTTCAAGGAGTGTTTTGCCGTGATCTAACGGTGGTGGGGAATTTACTTTCACAAAGGTTTAGTAGTAGGTCAATTCCGGTCAAATATGAGGCACTTAGTTGTTGA 1764 0.4082 MAVTTPYQNVTEKKHWWLTNRMIVEKYIKDARTLIASQERNEIVSALSLLDAALTISPSSDQALELKARSLLYLRKFKDVANMLQDYIPSLKMANDDSSSVSSDGSSQQLSREGVKLLSSSDSSVTDQSFIKCFSVSDLKKRVMAGLCKTGDNQGYWRYLVLGKACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLWNTPFSGDDAVSKPPATTPPKSPLTESETVNQLLAHIKFLLRRRAAAIAAMDAGLHSEAIRHFSKIVDSRRGAPQGFLAECYMHRATANRSAGRIADSIADCNRTLSLDPTCIQALESRASILETIRCYQDCLHDLEHLKLLYNTILRDRKLAGPLWKRHNVRYNEIPGKLCTLTAKIQQLKQKVSSGENLRNVDFYGLIGLRRGCGRSELQRAHLLLCLKHKPEKATCFIERCELADERDIESVKDRARMACMLLYRLLQKGYTNVMNSIAEEENAEKQKKLVLQLQQTEQKLVLNANSNANANSIANVNANANVNSVVVQVMQKKKNRDEMEDKFAMSSPSIANPTVFQGVFCRDLTVVGNLLSQRFSSRSIPVKYEALSC 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04472 587 Gene3D Tetratricopeptide repeat domain 213 357 IPR011990 GO:0005515
Trre1g04472 587 PANTHER OS01G0273500 PROTEIN 8 587 - -
Trre1g04472 587 SUPERFAMILY TPR-like 249 344 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04472 Trre-Chr1 50620132 50622816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04472 - - gmx:106797171 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04472 1 50620132 50622816 Trre1g04472 1 50620132 50622816 ECH
Trre13g04798 13 54635126 54637753 Trre1g04472 1 50620132 50622816 PCT