Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04470 ATGGGAAACCATGTCTCATTTCGTCCTTCGGATTCGACAGGTAAAGTTGTTTTCTTAGATGGTTCAGTTCATGAATTTGATGAACAAATAACAGTTGCAGAGTTAATGATGGATCATCCACAAAAAGTAGTAGTTGAGTTTCATTCAGCTGTGAATCAGAAAAGACCAACACCATTACCAGCTGATAAGAAATTAGAAATGAAAAAGATTTATCTTATGCTTCCTGTGAAACAAGGAAAGCCTATAGGTTTAAGTAGCCAAGAAACTCGTCGCGTTCTTTTGATGGTTAATTCTGTTCTTAATTCTAATTATGTTTTATGTTCTTCTAAGTTACTTCCTTGGTTTAGTAGTTTATGTCATAGTAGTGGAATTGTGGAGCCTCAGAGAAAGGAAGAGGTGGAGGAGAAGAAGGAAGAGAGATGCGGTTTTTCGGAGAATTTACCGGAGATTTTGGAAGGGAGGCCTGATTATTTGAATAGGCAGATTTCTGCAAAAGGGTCATGGAAGCCTAGTTTGGATACTATTAAGGAGAAGAATATTGAGAAAAAACATAGTCATTGGTTGTTTCTCAAGAGTTATTAG 582 0.366 MGNHVSFRPSDSTGKVVFLDGSVHEFDEQITVAELMMDHPQKVVVEFHSAVNQKRPTPLPADKKLEMKKIYLMLPVKQGKPIGLSSQETRRVLLMVNSVLNSNYVLCSSKLLPWFSSLCHSSGIVEPQRKEEVEEKKEERCGFSENLPEILEGRPDYLNRQISAKGSWKPSLDTIKEKNIEKKHSHWLFLKSY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04470 193 Pfam PADRE domain 1 177 IPR025322 -
Trre1g04470 193 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 10 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04470 Trre-Chr1 50584490 50585071 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04470 - - gmx:100784884 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04470 1 50584490 50585071 Trre1g04470 1 50584490 50585071 ECH
Trre13g04801 13 54678169 54678753 Trre1g04470 1 50584490 50585071 PCT