Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04801 ATGGGAAACCATATTTCATTTCATGCAACAACTAAAATTATTTACTATGATGGTTCAATTCAAGAATTTGATCAACCAATAACAGTAGCAGAACTCATGTTAGAAAATCCAAAACATGTTGTTGTTGAGTTTCATTCAGCAATAAACCAGAAAAAACCAACACCATTACCAGCTGACAAGAACCTAGAAATGAACAAAAAATATGTTATGGTTCCAATGAAACCAGGGAAGCCTGTAGGATTAAGCGCCGAAGATTGTCGTCGAATAGTTAATTCTTCTCTGCATTCAAATTATCTCATGCGTTCTCAAGGTTTTATTCCTTGGATTGTAAGGTTTATGAAGAAAAAGAAAGTTGAAATTGGAGAGGTTGAAACAAGTTTTCAGATAAATGAAGAAGAGAGGTTTGAATTTTGTGAGTTTTTGCCAGAAATGATGGAAGAGGGAGCAGAGTATTTGAATTTGAGTAGGCAATTGTCAGGGAAAGGGTGGAAGCCTAGTTTGGATACTATTAAGGAAAAGAAAGTTAAGAAAAAGCTTTCTGGTTGGTTATTCCTCAGAAGTGCTTTTATTGGTACAAAGATTTGA 585 0.3453 MGNHISFHATTKIIYYDGSIQEFDQPITVAELMLENPKHVVVEFHSAINQKKPTPLPADKNLEMNKKYVMVPMKPGKPVGLSAEDCRRIVNSSLHSNYLMRSQGFIPWIVRFMKKKKVEIGEVETSFQINEEERFEFCEFLPEMMEEGAEYLNLSRQLSGKGWKPSLDTIKEKKVKKKLSGWLFLRSAFIGTKI 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04801 194 Pfam PADRE domain 1 172 IPR025322 -
Trre13g04801 194 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 9 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04801 Trre-Chr13 54678169 54678753 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04801 - - psat:127132622 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04801 13 54678169 54678753 Trre13g04801 13 54678169 54678753 ECH
Trre13g04801 13 54678169 54678753 Trre1g04470 1 50584490 50585071 PCT