Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04459 ATGGCAGCAACAATGGCTGGTGTGAGTCTTTCAAGTCCTAGAGTTCTTATCAAGGGACCAGAGTCACTACAAAAGTCTCAAACCATCAGGTTCGCACCAGTGTTGATGTTCAACCAAAGGTGGACCGGCAAGGCCAGTTCGACCAGGATGGTAACCTTTCGATCGGTGCAGGCAGTACCGGAGAGCAAAACTGGGAGTGTGGAAGAGAGCATAAAGAACGCTGAGGAGACATGTGCAGGAGACGCCACTAGCGGCGAGTGTGTAGCGGCCTGGGATGAGGTGGAGGAACTAAGCGCGGCCGCAAGCCATGCAAGGGATAAGAAGAAATTAGACGACCCTCTTGAGGCATACTGCAAGGACAACCCGGAGACTGATGAGTGTCGTACCTATGATAACTGA 399 0.5213 MAATMAGVSLSSPRVLIKGPESLQKSQTIRFAPVLMFNQRWTGKASSTRMVTFRSVQAVPESKTGSVEESIKNAEETCAGDATSGECVAAWDEVEELSAAASHARDKKKLDDPLEAYCKDNPETDECRTYDN 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04459 132 SMART CP12_2 67 132 IPR003823 -
Trre1g04459 132 MobiDBLite consensus disorder prediction 101 132 - -
Trre1g04459 132 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 5 132 IPR039314 -
Trre1g04459 132 Pfam CP12 domain 66 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04459 Trre-Chr1 50462511 50462909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04459 - - ccaj:109814754 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04817 13 54816937 54817332 Trre1g04459 1 50462511 50462909 PCT