Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04817 ATGGCAACAATAACTAGTCTAAGCATTTCAAATCCCAAATTTTTCTTCAAATCATCGGCAATATTTCAACAAAATGCCCAATCCATCAAGATCTCTTCGGCGTCGCCGCTACAAACACGGCGAGCTATGTTCGGGTCGGGTCGGATAATGATTGTCCGACCCGTTCGCGCTGCACCAGAACAGATATCAAAGAAGGTAGAAGAGAGCATAAAGAGTGCGCAAGAGACATGTGCTGATGATCCAGTTAGTGGAGAATGCGTTGCGGCGTGGGATGAGGTGGAGGAACTCAGTGCTGCGGCGAGTCATGCAAGGGATAGGAAGAAGGAATCTGATCCGTTGGAGGAATACTGTAAGGATAATCCGGAGACTGATGAGTGCAAAACTTATGATAATTGA 396 0.4646 MATITSLSISNPKFFFKSSAIFQQNAQSIKISSASPLQTRRAMFGSGRIMIVRPVRAAPEQISKKVEESIKSAQETCADDPVSGECVAAWDEVEELSAAASHARDRKKESDPLEEYCKDNPETDECKTYDN 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04817 131 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 5 131 IPR039314 -
Trre13g04817 131 Pfam CP12 domain 62 130 - -
Trre13g04817 131 MobiDBLite consensus disorder prediction 100 131 - -
Trre13g04817 131 SMART CP12_2 62 131 IPR003823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04817 Trre-Chr13 54816937 54817332 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04817 - - gmx:100812168 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04817 13 54816937 54817332 Trre1g04459 1 50462511 50462909 PCT