Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04271 ATGACTCTGATCACCGAAGAGATCAAAGCCAAAGCAGAAGTATACCAAGGAGATGAAATCTGCCAAGTGAAATCCAAGGAACTGCTCTTGGAAATAAACCTGCCCAATGGCCTTTTGCCTTTGAAAGACATCGAAGAATGTGGATATCATAGGGAGAGTGGATTTGTGTGGCTTAAGCAGAAAGAAAGCAATACTCACAAGTTTGAGAAAGTTGATAGGCAAGTGACCTATGGTACTGAAGTCACTGCCTATGTTGAGGTTGGTAAGATCAAGAAGCTAACTGGTGTGAAGGTGAAGGAGCTGTTGGTTTGGCTCCCACTGCATGAAATTGAATTGGATAATCCACCCACTGGCAAAATCACTTTCAGGGCCATTACAGGGCTTTTCAGGACATTTCCTGCCTCAGCTTTTGAACTAGAAGAGGAAGTTAAGGATGTGAAGGAAGAAAACAAAGATCAAGTCAAAGAAGCAGAAGCACCTGCTGCTACTGCTGCTACTGTTGAAGTCAAAGAGCAATGTTTGTTATGTTTCAGGGTCTTTAACTATGCTGCTCTCATGGAGCAGTTTACTTAA 573 0.4258 MTLITEEIKAKAEVYQGDEICQVKSKELLLEINLPNGLLPLKDIEECGYHRESGFVWLKQKESNTHKFEKVDRQVTYGTEVTAYVEVGKIKKLTGVKVKELLVWLPLHEIELDNPPTGKITFRAITGLFRTFPASAFELEEEVKDVKEENKDQVKEAEAPAATAATVEVKEQCLLCFRVFNYAALMEQFT 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04271 190 PANTHER T31J12.3 PROTEIN-RELATED 14 141 IPR007493 -
Trre1g04271 190 Coils Coil 136 156 - -
Trre1g04271 190 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Trre1g04271 190 SUPERFAMILY At5g01610-like 4 145 IPR036758 -
Trre1g04271 190 Gene3D - 5 149 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04271 Trre-Chr1 48364239 48364918 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04271 - - gmx:100500427 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04271 1 48364239 48364918 Trre1g04271 1 48364239 48364918 ECH
Trre13g04992 13 56037664 56038119 Trre1g04271 1 48364239 48364918 PCT