Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04992 ATGTCTTTGGTAACAGAGGAAATCAAATCAAAAGCTGAGGTTTACCATGGTGACCAACTTTGTCAACTGAAATCAAAAGAGCTTCTGGAAGAAATTGCTCTTCCAAATGGTCTTTTACCATTGAAAGACATCATAGAAGTTGGTTACAACAGAGAAATAGGTTTTGTTTGGTTGAAACAGAAAAAAAGCATAACACATAAGTTTGAGAAAATTGGTAGAACTGTTTCATATGCTACTGAAGTTACTGCAGAAGTTGAAAAAGGTAAGATTAAGAAACTGAATGGTGTGAAAGCCAAAGAGCTTTTGATTTGGCTTACACTTAATGAGATTTATGTTGATGATCCACCAACTGGTAAAATCACTTTCAAAGCTTATTCTGGACTTTCTAGAACTTTCCCTGTTTCTGCTTTTGAACTTGAAGAAGAGAAATCAAGTGGTACTGTCAAAGAGATCTAA 456 0.3465 MSLVTEEIKSKAEVYHGDQLCQLKSKELLEEIALPNGLLPLKDIIEVGYNREIGFVWLKQKKSITHKFEKIGRTVSYATEVTAEVEKGKIKKLNGVKAKELLIWLTLNEIYVDDPPTGKITFKAYSGLSRTFPVSAFELEEEKSSGTVKEI 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04992 151 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Trre13g04992 151 Gene3D - 5 148 IPR036758 -
Trre13g04992 151 PANTHER T31J12.3 PROTEIN-RELATED 14 140 IPR007493 -
Trre13g04992 151 SUPERFAMILY At5g01610-like 3 142 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04992 Trre-Chr13 56037664 56038119 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04992 - - gmx:100500427 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04992 13 56037664 56038119 Trre13g04992 13 56037664 56038119 ECH
Trre13g04992 13 56037664 56038119 Trre1g04271 1 48364239 48364918 PCT