Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04210 ATGGACTCTGATTCCTCTTGGACTGCTCGTCTCTCTTCCGCCTCTAGACGTTATCAAGCCGCTCTTCAATCTCGATCAGATATGTTTATGGGTTTTGATGAGAATGAAGCTGATGAAGATATTAGGGAAGAGTTTCTGTGTCCATTTTGTTCTGAGTATTTTGATATCGTTGGATTGTGCTGCCACATTGATGAAGAGCATCCAATGGAGGCAAAAAATGGGGTTTGTCCAGTTTGTGCATTGAGGGTGGGGGTTGATATGGTCGCGCACATAACCCTACAACATGGAAAGGAATACGTGCAGCGCAAGAGGAAATCGCGTAAAGGTGGATCATATTCAACACTTTCTTTATTGAGGAAGGAGCTGAGAGAAGGAAATTTACAATCCCTTTTTGGTGGATCTCAATGTATAGTGTCCTCGTCTAATGCAGCACCTGATCCACTGCTGGATTCATTTATATCGCCTTTAGGTCATGAATCTGTGAGTTCTCAGTCTCACGCACATAATGAGACAAGATCATCCAAGAAAATCTCAGATGAGACTGTATCAAGAAGCCATGTGGAGACACCAACCATGTCAGTTAAGGATAAGGAGGAGAAGACGAAAAGATGTGAGTTTGTTCAAGGGCTGTTGATGTCCACCATACTTGATGATGATTTATGA 663 0.4268 MDSDSSWTARLSSASRRYQAALQSRSDMFMGFDENEADEDIREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGVCPVCALRVGVDMVAHITLQHGKEYVQRKRKSRKGGSYSTLSLLRKELREGNLQSLFGGSQCIVSSSNAAPDPLLDSFISPLGHESVSSQSHAHNETRSSKKISDETVSRSHVETPTMSVKDKEEKTKRCEFVQGLLMSTILDDDL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04210 220 Pfam Drought induced 19 protein (Di19), zinc-binding 43 96 IPR008598 -
Trre1g04210 220 PANTHER PROTEIN DEHYDRATION-INDUCED 19 30 217 IPR033347 -
Trre1g04210 220 MobiDBLite consensus disorder prediction 169 183 - -
Trre1g04210 220 MobiDBLite consensus disorder prediction 159 199 - -
Trre1g04210 220 Pfam Stress-induced protein Di19, C-terminal 115 215 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04210 Trre-Chr1 47551442 47553595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04210 - - gmx:100795155 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04210 1 47551442 47553595 Trre1g04210 1 47551442 47553595 ECH
Trre13g04784 13 54533243 54535192 Trre1g04210 1 47551442 47553595 ECH
Trre1g04210 1 47551442 47553595 Trre13g04784 13 54533243 54535192 ECH