Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04784 ATGGAAGACGAGACTTTGAGTTTTGGCCTCTCTACTTCTTCTAGAACCTACCAATCCCACTTAGACCTCTTAATCGACTTTGAAGATTTTCATGATGATGAGTTGAGGACTACTTATCCATGCCCATTTTGCGAGGATGATTTTGAACTTCTAGACCTATGTTGCCACATTGATTTGGATCATCCAATAGAAGCCAACTCTGGGATTTGTCCAGTTTGTGCCATTCATCACAAATCAAAATACCACAAACATGATTCCTACTCAAATCGTTCGTTTTCAAGAAAGCGACGAGATGGACATTGGCAATCTTCTTCTGATGATGGGTTATCGCCTGTTATGTCTACCTCACAGACAGCTTGTGATCCATTGCTGTCATTTTTATGCGGTGCAGCTTCTTCCAATGAACATGAAAATGTGCAGCTCGATTCATCAAGCGGAGCGAGCATCGAAGAAATACACTCGGATGATACAGTGTTAGAAAGAGATGTTCCACCATCATTATCTGACAAAGACCAAGTGGAGAAAGCAAGGCGTAGTGAGTTTGTACAGGGGCTTTTGATGTCTACTATACTTGATACTGAATTTTGA 588 0.4116 MEDETLSFGLSTSSRTYQSHLDLLIDFEDFHDDELRTTYPCPFCEDDFELLDLCCHIDLDHPIEANSGICPVCAIHHKSKYHKHDSYSNRSFSRKRRDGHWQSSSDDGLSPVMSTSQTACDPLLSFLCGAASSNEHENVQLDSSSGASIEEIHSDDTVLERDVPPSLSDKDQVEKARRSEFVQGLLMSTILDTEF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04784 195 MobiDBLite consensus disorder prediction 85 114 - -
Trre13g04784 195 Pfam Stress-induced protein Di19, C-terminal 92 190 IPR027935 -
Trre13g04784 195 MobiDBLite consensus disorder prediction 85 103 - -
Trre13g04784 195 PANTHER PROTEIN DEHYDRATION-INDUCED 19 27 192 IPR033347 -
Trre13g04784 195 Pfam Drought induced 19 protein (Di19), zinc-binding 38 82 IPR008598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04784 Trre-Chr13 54533243 54535192 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04784 - - mtr:25499621 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04784 13 54533243 54535192 Trre1g04210 1 47551442 47553595 ECH
Trre13g04784 13 54533243 54535192 Trre13g04784 13 54533243 54535192 ECH
Trre1g04210 1 47551442 47553595 Trre13g04784 13 54533243 54535192 ECH