Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03811 ATGTTCCACAAGATTTGTCGAGTACCTGTTGTAGAGTATTATGTTGAGTTTAAAGAGTTGATGGAAGAAGCATTTATGATACTTGAAAATGGGATTATAAATGGTGATGGGTTTTATGCAATGAATCATAAAAAAGTGAAATTGATGGCACAATGTGAAGGTGGTTTAAGAACTTGTGATTGTAGTGAATGTGTTAGTGATGCAGTGATGGTTGCAAAGGAAGAATGTGATAGTTCAGCTACGGTAGAAATATATTTTGACAAGTGTTTCATAAGCTATACATACATGCTAAAATCAGGTAATGGTGATTATGAAAGCTATGTTCCAGGAGCAAGCAGAAACAACAACAGCCAAAAGTTCCAAAAATTGATAGCAATAATTGTTGGAGGGGTTGCAACTCTGTTTCTGGGTCTTATATTTGTATCCCTACTTAACTCTCGGCTTAGAAAAGACGACTACGAGTAG 465 0.357 MFHKICRVPVVEYYVEFKELMEEAFMILENGIINGDGFYAMNHKKVKLMAQCEGGLRTCDCSECVSDAVMVAKEECDSSATVEIYFDKCFISYTYMLKSGNGDYESYVPGASRNNNSQKFQKLIAIIVGGVATLFLGLIFVSLLNSRLRKDDYE 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03811 154 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 1 146 - -
Trre1g03811 154 ProSiteProfiles Gnk2-homologous domain profile. 1 98 IPR002902 -
Trre1g03811 154 Pfam Salt stress response/antifungal 42 94 IPR002902 -
Trre1g03811 154 Gene3D - 10 96 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03811 Trre-Chr1 37101781 37103387 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03811 - - gmx:100795973 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g03811 1 37101781 37103387 Trre1g03811 1 37101781 37103387 ECH
Trre13g04039 13 48374609 48376231 Trre1g03811 1 37101781 37103387 PCT