Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03465 ATGTCTACTCCTCAAAAGGATCCACTTTCGCAAGCTGAAACAACGTGCGGATCACTTCTTTATGAACTTCAGATAATATGGGACGAAGTTGGTGAGGCTGAGCCTGACAGAGACAGAATGCTGTTTGAGCTTGAACAAGAGTGTCTTGAAGTGTACAGAAGGAAGGTAGATCAGGCAAATCGGTCCAGAGCTCAACTAAGGCAGGCGATTGCTGATTGTGAGGCAGAACTTGCAGCTATCTGTTCCGCAATGGGAGAGCGACCGGTACACATTAGACAGTCCGATCAAAATGCTGGAAGCCTAAAGGAAGAGCACGCACGGATTCTTCCATATTTGGAGGAGATGAAAAAGCAGAAGTTTGAACGCAGAAATCAATTTATAGAAGTTCAGGAGCAGATTCAAAACATCTCAATTGAGATTTATGGCCCCAAAGAGTATGTTCCTTCCATTGTTGATGAAACTGATTTATCCCTGAGAAAACTTGAAGATTTGCACAGACAACTAAATGCACTTCAAAGTGAAAAGAGTGATCGCCTAAAGAAGGTTCAGGAGCACCTGTACACATTAAATTCTCTTTGTTTAGTGCTCGGGTTTGACTTTAAGCAGACAGTCCTGGGAATTCATCCCAGTTTGGGAGACAGGGAAGGACCTACGAGTGTAAGCAATGATACAATCCAGCAACTCGCTGTTGCTACACAACAACTACGGGAAATTAAATTACAGAGAATGCAAAAGCTCCAAGATCTTGCAACAACAATGCTGGAGCTCTGGAACTTGATGGATACACCTATTGAAGAGCAACAAATGTTTCAGAATGTTACATGTAATATAGCTGCATCAGAAGATGAAATAACTGAACCAAACACCTTGTCCGCCGACTTTATCAATTGTGTGGAGGTGGAAGTATCTAGGTTAGAAGAATTAAAATCCAGCAAAATGAAGGAGCTTGTACTAAAGAAGAGAACAGAGCTGGAGGAGATTTGTCGAAAAACTCATTTGGTTCCAGAAACAGATGGTGCAATTGAATATGCTGTTGAAGCTATAGAATCTGGAGCCGTGGACCCTGCTTGTGTGCTCGAACAGTTTGAGCGTCAGGTTGCCCAAGTTAAAGAGGAAGCTTTGGGTCGAAAGGACATACTTGAAAAGGTTGAGAAATGGCTGGCAGCATGTGATGAAGAGTCTTGGCTTGAGGAATACAACAGGGATGATAATCGATATAATGCTGGAAGAGGCGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCTCGTGGGTTGGTTAACAAAATTCCAGCAATGGTAGATGTGTTGACTTCAAAAACTATAGCATGGGAAAAGGAAAGAGGTGTCGAGTTCACATATGATGGTATTCGTCTACTCTCAATGATTGAAGAGTACAATATATTACGGCAAGAGAAAGAGCAAGAACGCCGTAGGCAGCGGGACCTGAAGAAGCTTCAGGGACAAATGATAGCGGAACAGGAGGCACTCTATGGATCAAAACCAAGCCCTTCCAAGCCCCAAAGTGTAAAGAAGGGATCTAGGATGTCAACCGGAGGTGCAGCTAGTAGAAGAGTCTCTCTTGGGGGTGCAATGCTTCAGACTCCAAAACCTGATTCAAAAGCTACTAATTCACATGCCACGAGAAAGACTGACAAAGTGCTCCAATTTGAGCAAAGTTACTTGGATGATGGTGCTTCCTGTTTATCACCAGCTCGAAGAGGACTGGATATTGCTGGCATTCCTGTCCAAAAACATTCACTTGGTGCTGCTAGTGCTCACGGCATAGAATCCCCTCTAACAAGACAACCTTTTTCTAACATATCTTCAAAAGAAAATGTGGCAAATGAACCTAGCACACAAAAAACACTGCCCTTCACTAGTCCCTGCAAGGCAATGACTGTGGCTGATGTAGAGAATATGACTCCAAAGGCAATGCCTATTCCTATCCCTGCAACACCTTCAACCGTATCAGTTCCTATGAGTATGGCCTTGACTCCTGCTCCTTCATCAGTTTTGATGAATATGGCCATGACTCCAGTTCCCAAGTCAGCTCCTTTTGGATGTGACATGACTCCAGTCCTAGAGATTGAATATTCCTTCGAGGAAAGAAGACTTGCTCATTATATGTTAGCATGA 2136 0.4345 MSTPQKDPLSQAETTCGSLLYELQIIWDEVGEAEPDRDRMLFELEQECLEVYRRKVDQANRSRAQLRQAIADCEAELAAICSAMGERPVHIRQSDQNAGSLKEEHARILPYLEEMKKQKFERRNQFIEVQEQIQNISIEIYGPKEYVPSIVDETDLSLRKLEDLHRQLNALQSEKSDRLKKVQEHLYTLNSLCLVLGFDFKQTVLGIHPSLGDREGPTSVSNDTIQQLAVATQQLREIKLQRMQKLQDLATTMLELWNLMDTPIEEQQMFQNVTCNIAASEDEITEPNTLSADFINCVEVEVSRLEELKSSKMKELVLKKRTELEEICRKTHLVPETDGAIEYAVEAIESGAVDPACVLEQFERQVAQVKEEALGRKDILEKVEKWLAACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARGLVNKIPAMVDVLTSKTIAWEKERGVEFTYDGIRLLSMIEEYNILRQEKEQERRRQRDLKKLQGQMIAEQEALYGSKPSPSKPQSVKKGSRMSTGGAASRRVSLGGAMLQTPKPDSKATNSHATRKTDKVLQFEQSYLDDGASCLSPARRGLDIAGIPVQKHSLGAASAHGIESPLTRQPFSNISSKENVANEPSTQKTLPFTSPCKAMTVADVENMTPKAMPIPIPATPSTVSVPMSMALTPAPSSVLMNMAMTPVPKSAPFGCDMTPVLEIEYSFEERRLAHYMLA 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03465 711 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 565 IPR007145 GO:0000226|GO:0008017
Trre1g03465 711 MobiDBLite consensus disorder prediction 500 515 - -
Trre1g03465 711 MobiDBLite consensus disorder prediction 492 550 - -
Trre1g03465 711 FunFam 65-kDa microtubule-associated protein 6 366 499 - -
Trre1g03465 711 Coils Coil 49 76 - -
Trre1g03465 711 Coils Coil 161 181 - -
Trre1g03465 711 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 507 - -
Trre1g03465 711 Coils Coil 458 488 - -
Trre1g03465 711 Gene3D - 365 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03465 Trre-Chr1 31184590 31189085 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g03465 10 543 EF-hand Containing Proteins AT5G62250 56.618 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03465 K16732 - gmx:100777734 1104.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01539 11 14996148 15000935 Trre1g03465 1 31184590 31189085 ECH
Trre1g03465 1 31184590 31189085 Trre1g03465 1 31184590 31189085 ECH
Trre11g01539 11 14996148 15000935 Trre1g03465 1 31184590 31189085 PCT