Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03459 ATGGCTCTAGAAACTCTCCTCTTCAAGGTCAAAACCGCCATTTCAAATAGCTTCGACTCTGTTCCACCCAAGCTTCTCAAAAAGAAACCTTCTTTCAAATCCAAACGAAACGTCGACGTTTTAGCTTTCGAGATCGCTGGTGTTATGTCGAAGCTTCTTCATCTTTTTCAGTCTCTTTCCGATGTAACCATTGTTCGAATCCGAAACGACGCCGTTACGCTCGAAGGTGTTAGGAAAATCATATCCAACGATGAGTCGTTTCTTCTTGGACTCGCTTGTGCTGAGTTTGCTGAGACTCTTCGAATCGTTGCTAACTCGGTTACCCAACTCAGTCACCGATGCGAGGATCCTAATCTTAGGAATTTCCATCGAGCTTTTCTTGAGTTTGCTGATTCGGGTCGTGACCAAAATGGGTGGGCTTTTTCTAGCCCAAAGGAAATTGAAGCTAAGTTTAGAAAAATGGAACGTTACGTGATGCTTACGGTAACTTTACACCGTGAAATGGAAGAGCTTTCTGTTTTGGAAAATGGGTTTAGAAAAGCTTTGAATTTGAATCATCATCATAGAAATAATCATCATCGTAATAATAGTTGTGAAGGAAATGAAGGTTCTTTAGGTGTTGGAAAAGAGCAGAAGATTTATGAACTTCAGCAGAAGATTTGTTGGCAGAAACAAGAGGTTAAGGATCTGAAAGATAGATGTTTGTGGAGTAGAAGTTTTGATGGTGTTGTTTTATTACTTGTGAGATTTTGTTTCACTGTTTTAGCAAGGATTAAGGTTGTTTTTGGTATTGGTCATTCTATGCCTTGTTTATCATCACCTAATTTGTCAGCTTCTGCAACTGTTTATCCCTCTGATCAGAATCCAAATTCTTGTCATGAATTTGTTTCTGGGTCATTGGAAAGCTCTAAGCTTGAACAGATTAAAGAAGGTTTGGAAAATGGGTTTTTTGAGTCTAACTCAAAGCTTTTGAAACCACCTCCTAGTACTTTAGGTGCTGCTGCTTTGGCTTTACATTATTCCAACTTGATCATAGTGTTGGAGAAGATGATAAAGACACCTCATTTGATTGGTTTGGATGCTAGGGATGATTTGTATGGTATGTTACCTAGTAGCATAAGGTCAAGTTTAAGGGCTAGGTTGAAAGGAATTGGGTTTTGTGCAAGTGATCCTGTTCTTGCTGGTGAATGGAAGGATGCTTTGGGGAGGATATTAGGGTGGTTATCACCTTTGGCACATAACATGATTAAGTGGCAAAGTGAAAGGAGCTTTGAGCAGCAAAATTTGGTGCCTAAGACTAATGTTTTGCTTTTGCAGACTTTGTTTTTTGCAAACAAAGAGAAGACTGAAGCTGCTATAACTGAGTTGCTTGTTGGGTTAAATTATATTTGGAGGAGAAGAGGGTCTAGTAATCCGGAGTTCGACAGTGAAGTAAGGTAG 1440 0.3951 MALETLLFKVKTAISNSFDSVPPKLLKKKPSFKSKRNVDVLAFEIAGVMSKLLHLFQSLSDVTIVRIRNDAVTLEGVRKIISNDESFLLGLACAEFAETLRIVANSVTQLSHRCEDPNLRNFHRAFLEFADSGRDQNGWAFSSPKEIEAKFRKMERYVMLTVTLHREMEELSVLENGFRKALNLNHHHRNNHHRNNSCEGNEGSLGVGKEQKIYELQQKICWQKQEVKDLKDRCLWSRSFDGVVLLLVRFCFTVLARIKVVFGIGHSMPCLSSPNLSASATVYPSDQNPNSCHEFVSGSLESSKLEQIKEGLENGFFESNSKLLKPPPSTLGAAALALHYSNLIIVLEKMIKTPHLIGLDARDDLYGMLPSSIRSSLRARLKGIGFCASDPVLAGEWKDALGRILGWLSPLAHNMIKWQSERSFEQQNLVPKTNVLLLQTLFFANKEKTEAAITELLVGLNYIWRRRGSSNPEFDSEVR 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03459 479 PANTHER BNAC09G50660D PROTEIN 32 470 - -
Trre1g03459 479 Pfam Domain of unknown function (DUF3475) 40 95 IPR021864 GO:0045927
Trre1g03459 479 Pfam Protein of unknown function (DUF668) 330 417 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03459 Trre-Chr1 31090695 31092945 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03459 - - gmx:100787581 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g03459 1 31090695 31092945 Trre1g03459 1 31090695 31092945 ECH
Trre11g01525 11 14797387 14798880 Trre1g03459 1 31090695 31092945 PCT