Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01525 ATGGCCCTCGAAACTTTACTCTTAAGAGTAAAAACAGCTTTTTCAAACAGTTTCGACTCAGTTCACAAAACGACACCGTCTTCAAAAACAAACCCAAAACGCATCGCCGTTTTAGCTTTCGAAGTCGCCGGAGTTATGTCGAAGCTTCTTCATCTCTGGCAATCACTTTCCGACGCAAATATTGTTCGTCTTCAAAACGACGTCGTTTCACTCGAAGGCGTTTTGAAATTAATCTCAAACGACAAGTCGTTTTTAATCAAACTCGCTGTTGCTGAGTTCGCTGACTCACTCCGACTCGCTTCTGACTCAGTCTCTAGACTCAGTCTCAATTGCAATGACCCAACACTTCGATCTTTCAACCGAGTTTTCACTGAGTTCGCTGACTCGGGATTTGACTCAGTTGGTTGGACTCTCACAACCCCAAAAGAAATTGAATCCAAACATAGAAGAATGGAACGTTACGTGACTCTCACGTTAACTCTTCATAGAGAAATTGATGAGCTTTCACTTTTAGAAAGCACGTTGAGAAAAGCACTTCTCAACAACACCACCAACAACAAAAGCAGAATCAGTGATCTTGAACAAAAGATTTTCTGGCAGAAACAAGAGGTAAAGAATCTCAAAGAAAAATCATTATGGAACAAAGGTTTTGATAATGTTGTTTTGTTATTAGCAAGATTTGTTTTCACTTTGTTAGCAAGAATTAAGGTTGTTTTTGGAATTGGTAATGGTAATGGAAATGGAAACCATTTACCTTATTTATCACGAAGTTTATCAACTTCTGCTGCTGTTTATCCTTCAGATCATCAAAAAGATCAAAACTTTGTATCTGGGCCGTTGAAAAGTTTCAAACTTGATGATTATTCTTCTGATCATCAAAAAGTTGAAAACTTTTCATCTGGGCCGTTGAAAAGTTTCAAACTTGATGAGAAAAAAGTAGATTTAAGAAATGGGTTTTTTGAGTCAAATTGTAAAGTTTTGAAACCACCACAAGGTAGTTTAGGTGATTCAGCTTTATCATTACATTATGCTAATTTGATTATTGTTATGGAAAAAATGATTAAATCACCTCAATTAGTTGGTGTTGATGCTAGAGATGATTTATATGCTATGCTACCAAATAGTATAAGATCATCATTGAGATTAAGGTTAAAAGGGTCAATTGGATTTAGTGCTTGTGATCCTTTATTGGCTAATGAATGGAGAAATGCTTTGGGAAGGATACTTTGTTGGTTGTTACCATTGGCACAAAATATGATTAGGTGGCAAAGTGAAAGGAGTGTTGAAGAGAAAAGATTGGTTCTTAAGAAATCTAATGTGTTGCTTTTGCAAACATTGTTTTTTGCTAATAAGTTGAAGACAGAAGCTGCTATAACTGAGTTGCTTGTTGGTTTGAATTATATTTGGAAGTTTGAGAGGGAAATGACTGCTAAGGCTTTGTTTGAATGTAACAATGATTTTAATGGGTTTTTAAGTTTGTACAAATCTAGTTAA 1494 0.3568 MALETLLLRVKTAFSNSFDSVHKTTPSSKTNPKRIAVLAFEVAGVMSKLLHLWQSLSDANIVRLQNDVVSLEGVLKLISNDKSFLIKLAVAEFADSLRLASDSVSRLSLNCNDPTLRSFNRVFTEFADSGFDSVGWTLTTPKEIESKHRRMERYVTLTLTLHREIDELSLLESTLRKALLNNTTNNKSRISDLEQKIFWQKQEVKNLKEKSLWNKGFDNVVLLLARFVFTLLARIKVVFGIGNGNGNGNHLPYLSRSLSTSAAVYPSDHQKDQNFVSGPLKSFKLDDYSSDHQKVENFSSGPLKSFKLDEKKVDLRNGFFESNCKVLKPPQGSLGDSALSLHYANLIIVMEKMIKSPQLVGVDARDDLYAMLPNSIRSSLRLRLKGSIGFSACDPLLANEWRNALGRILCWLLPLAQNMIRWQSERSVEEKRLVLKKSNVLLLQTLFFANKLKTEAAITELLVGLNYIWKFEREMTAKALFECNNDFNGFLSLYKSS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01525 497 Coils Coil 190 210 - -
Trre11g01525 497 PANTHER BNAC09G50660D PROTEIN 29 484 - -
Trre11g01525 497 Pfam Domain of unknown function (DUF3475) 37 92 IPR021864 GO:0045927
Trre11g01525 497 Pfam Protein of unknown function (DUF668) 334 421 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01525 Trre-Chr11 14797387 14798880 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01525 - - mtr:25497139 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01525 11 14797387 14798880 Trre11g01525 11 14797387 14798880 ECH
Trre11g01525 11 14797387 14798880 Trre1g03459 1 31090695 31092945 PCT