Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g03083 ATGACACCTTGCATCTTTTCTGTGCGCAGTGCTTTCTGTAATCCTGCTGATGTTGAAGCATTTACTGAGGAGAAAAAACAGTCTCTTGTCAAACGTCAAGGAAAGGGTGCTGACTTTGTTCGTGCTGTTAAGGAGATTGTTGATAGTTATGAGAAATTAAAAAAAGAGAGACAACTTGGTGAAGCTAACTGTGGTGGCAATGTCGCTGATGCAAATATTTCAAATTCTGCTATTAACTCAGGAGCATCTGATAACTCAGTTTCTCGTGAGGTAACAGCTACTTTACCTAAAGATTCTTCAAATTCTGTTGTTGACAGACATGATTTGGTATGTCCAGCTGAGGATGACTCAGCTGATGTATTGAAAGACGAATCTAATGATAAGGAGGCATCAAAGAAGGAGCTTAGTGATAATGCGCCTTCTGTACAATCGCCTAAGCCACTTACTTACTCTTCTCGAAAGAGATCTGCGGGTGACTTATGCCCACAGGGCTTCATAACAGATAGACATATGCCAGTACGAAGGAATAGAAGCACATCACGGGTCCAAAACGTCATGTTTCCCTGTAATGACAGTGGAAAGAATTCCGGCAGCCAATTAACCAATGCAACAGAGGGTACATCTGTAAGAAGGAATCAACGTCTTAGGAAATCACCTGATCTTGCTGGCTGTAATGATTTTGATTCATCTGCTTCAGTCTTGAATGGTAGTTTGGAGGATAAAGACAACAGCTCTGAAATTCTCACAAATGATTCCGATGAATTTAGCTTGAATGAGGGCAGTGCAATGGATTCAAATTATAAACACATTGAAACTATTGAATGCCCTGAAGAAGTTGAGCTGAAGAAAGGCCTTGATCTTAAAATAAAGGGTGTGGTCAATAAGAAGAAAAGAAACCCAAATAGGAAAAGGGCAACCAACGACACTTCCAAGTCTACCATTAGACTTGAGGAGGATCATGGTGTGCGGAATTCCAGTCAAAGTTCCCAGAATATTTGTGGAAATACTGAAGAGAAATGCTTTGAGCAAGATGGAGATGAACACTTGCCTCTTGTGAAACGAGCGAGAGTCAGAATGGGTAAATCATCTTCCACAGAGGGAGAACTCAATAGCACACCACATGCTCCAGGGAAAAGCTGTAAGGAAGATAATAACTCACCACCGCAGATTATAACATCCTCAAATTGTGAGAATGGAAGCTCTGCTGATGGAGGCTCATCTGTCCTGATTGGAACTGTGGATAATGTTTCTCCTTCAAAGATTGTTGCTCCATGTTTTGAAAATCAGATAGGTAATACTAAGAGAGATCAACCATTTTGCTCTGTGGATGATGAAGCTGCTTTACCTCCATCTAAACGTCTTCATCGTGCTTTAGAAGCCATGTCAGCTAATGCTGCTAAAGAAGGTCAAGCTCGTATTGAATCATCATCCTCTAGAATGACATCAATTGGTATATCGGCTATCAAGACAAGTCCAGATATGACTATTAATAATCATGAAGGTGGTGGTTTAAAGTTGCAAAAGTCTGATGCCTGCGGCGGTAATTCTTCTCATATCATTGTGCATAGTTTGTCAGCCAATTCAAATCCAATGATTTCAACGGAAAATGATTCTTCTAAGCAAGAGGATAAGCCGTCAACCAGATTCCAAGCACAAGAAAATGGTAAGGATGTTCTCCCATGTGCTGCAGATCATGTTGAAGAACTTGGTGATTTTGTGGTTTGTCATACTGCTACTGCAGATTTGAAAATTCAAGTGCATAGGGAAATTTCTCCAAATCTTGATTCAAAATGTTGTGAAGTTGAAAGCAGTCGAGTTTCACCTCACCTGTCATTACCACCAAATAATGAAGACAATATTATAACAATGAATCATTCAAATACAACATCTGATGCACCAGAGCACAATAGAATAAGCCTTCATTCTGAAGCAGAGGTGGCGAAGAATGAAGTTATTTCCCCTCAAAATAATACTGATCTGCCTCGGAATGAGGTTCTTATTTCTGACGATACAAATTGCTTGAAACCAGCAGTTAATGATGTTAAAAGAGCAAATGAAATGAGTGAGATTGTAAAAGAGGTAGAGTGTGAAGTACCAGAGGAGGATTTGAATTCTGTTTCAACGTCTGACTGTCTAGGTGAAAAGGTTATTTCGGGCATTCGATCAAGTACTTCCTTGACAGATGGGGGAGATTGCATTCCACAAGGTTCACCTCCAAACACATCAATTTGCAATGTTTCTACATCAGACAGTAGTAATATCCTTCACAATGGCAGCTGTAGTCCTGATGTACATTTACACCAGAAACAAAGTTTATCTGGTCCTGTTGATGAAAGTAAGTATGGATCTGAAGCAACTCAACAATCAAGATCAATGGGCAAGTCAACTGAAGCGGCACGTGCTGCTTTGTTGTACTTTGAAGCAATGCTCGGGACATTGAAAAGAACAAAGGAAAGTATTGGCCGAGCAACACGCATAGCTATTGACTGTGCAAAGTTTGGCATTGCAGACAAGGTCATGGAAATTCTTGCCCATAATCTTGAAACTGAATCAAGTCTGCATCGAAGAGTGGATTTGTTTTTTCTTGTTGACTCTATTGCACAGTTTTCTCGAGGTTTAAAAGGTGATGTTTGTTTAGTATATTCATCCGCTATCGAAGCAGTCCTTCCTCGACTATTATCTGCTGCCGTTCCTCCTGGAAATGCTGCACAAGAGAACCGTAGGCAATGCCTTAAGGTTTTAAGGCTGTGGTTGGAGAGAAGAATCCTACCAGAACCCATGATTCGCCACCATATCCGGGAATTGGATTTATATAGTTCAATTTCTGCAGGTGTTTTTTCACGACGATCATTAAAAACGGAGAGGGCTTTGGATGACCCTATTAGAGAAATGGAGGGTATGCATGTTGACGAATATGGAAGCAACTCAAGTTTGCAGTTACCTGGGTTTTGCATGCCCCGGATGCTTAAAGATGAAGATGACAATGAAGGGAGCGATTCCGATGGAGGGAATTTTGAGGCTGTCACACCTGAGCATATTTCTGAAGTACATGAAATGACTTCTACAATTGATAAACACAGGCATATCTTGGAAGATGTTGATGGTGAGCTTGAAATGGAAGATGTGGCTCCCTCTCGTGATGTTGAAATGAATTCATTTTGCAATATTGATAGAGAAAATAGCACACAGTTTGACAAGAATCTTTCCCTGGCCTCTGCTCCTCTACCTCAGCTTGCACCTCAATGTTCCGCACCACCACCATCAGCCCCTCCGCCGCCACCACCTCCTCCACCACCTCCTCCACCACCACCGCCACCTCCTCCTCCACCACCACTTCCCATGTCACACCTTTCAAATTCCTCCGAGCCATGTCGTTCTGTATTTAATTCAACAGGTCATACAGAATCTCAGTCTATGAAAGACAACACACTTCGCCCTATGGCTCAGCCCTTGGCTGCACCAAATAGTAGCCAACCTAGTAGTGACTATCATGCCCCAGAATATAGAGAAATGCACGTGCCGGAGTCTACTTGCTCTTTCAACAGCTTCCCTGTCCCACCACCCATAAATTATCGGCATTCTGAGGGTGTTTCTATGCATAATAGAGGGCATTCTATAAGGCCGCCTCGCCATGTGCCGTCAAATCAATTTTCCTTTGTTCACGGGGAACAACATGTGAGACATCGTAGGGAGGTTCCACCACCTCCTCCTTACTCCAATAGGCAACACTTTGTGGAAAACATGGAGAGAGAGCACTTCTACCATAATAATCATGAAAGATTTAAACCACCGCCATATGATTACCGAGAGCGATGGGATGTTCCCCCACCTTATCCTGGTCCTATTTATCATGACGATGATATGCCTTCTCCTTATGGGTGTCATCCATGTGAACCACCTAGAATACCAGATCATGGGTGGAGATTTCCTCCCCGGTCAATGAATCACAGGAACAGCATGCCATTTAGACCACCCTTTGAAGACGCAATTCCAGTTACAAATAGAGGTCCAGGCTTTTGGCGGCCTAGGTGA 4032 0.4234 MTPCIFSVRSAFCNPADVEAFTEEKKQSLVKRQGKGADFVRAVKEIVDSYEKLKKERQLGEANCGGNVADANISNSAINSGASDNSVSREVTATLPKDSSNSVVDRHDLVCPAEDDSADVLKDESNDKEASKKELSDNAPSVQSPKPLTYSSRKRSAGDLCPQGFITDRHMPVRRNRSTSRVQNVMFPCNDSGKNSGSQLTNATEGTSVRRNQRLRKSPDLAGCNDFDSSASVLNGSLEDKDNSSEILTNDSDEFSLNEGSAMDSNYKHIETIECPEEVELKKGLDLKIKGVVNKKKRNPNRKRATNDTSKSTIRLEEDHGVRNSSQSSQNICGNTEEKCFEQDGDEHLPLVKRARVRMGKSSSTEGELNSTPHAPGKSCKEDNNSPPQIITSSNCENGSSADGGSSVLIGTVDNVSPSKIVAPCFENQIGNTKRDQPFCSVDDEAALPPSKRLHRALEAMSANAAKEGQARIESSSSRMTSIGISAIKTSPDMTINNHEGGGLKLQKSDACGGNSSHIIVHSLSANSNPMISTENDSSKQEDKPSTRFQAQENGKDVLPCAADHVEELGDFVVCHTATADLKIQVHREISPNLDSKCCEVESSRVSPHLSLPPNNEDNIITMNHSNTTSDAPEHNRISLHSEAEVAKNEVISPQNNTDLPRNEVLISDDTNCLKPAVNDVKRANEMSEIVKEVECEVPEEDLNSVSTSDCLGEKVISGIRSSTSLTDGGDCIPQGSPPNTSICNVSTSDSSNILHNGSCSPDVHLHQKQSLSGPVDESKYGSEATQQSRSMGKSTEAARAALLYFEAMLGTLKRTKESIGRATRIAIDCAKFGIADKVMEILAHNLETESSLHRRVDLFFLVDSIAQFSRGLKGDVCLVYSSAIEAVLPRLLSAAVPPGNAAQENRRQCLKVLRLWLERRILPEPMIRHHIRELDLYSSISAGVFSRRSLKTERALDDPIREMEGMHVDEYGSNSSLQLPGFCMPRMLKDEDDNEGSDSDGGNFEAVTPEHISEVHEMTSTIDKHRHILEDVDGELEMEDVAPSRDVEMNSFCNIDRENSTQFDKNLSLASAPLPQLAPQCSAPPPSAPPPPPPPPPPPPPPPPPPPPPPLPMSHLSNSSEPCRSVFNSTGHTESQSMKDNTLRPMAQPLAAPNSSQPSSDYHAPEYREMHVPESTCSFNSFPVPPPINYRHSEGVSMHNRGHSIRPPRHVPSNQFSFVHGEQHVRHRREVPPPPPYSNRQHFVENMEREHFYHNNHERFKPPPYDYRERWDVPPPYPGPIYHDDDMPSPYGCHPCEPPRIPDHGWRFPPRSMNHRNSMPFRPPFEDAIPVTNRGPGFWRPR 1343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g03083 1343 MobiDBLite consensus disorder prediction 303 322 - -
Trre1g03083 1343 Pfam CID domain 806 928 IPR006569 -
Trre1g03083 1343 MobiDBLite consensus disorder prediction 93 210 - -
Trre1g03083 1343 MobiDBLite consensus disorder prediction 988 1013 - -
Trre1g03083 1343 MobiDBLite consensus disorder prediction 136 151 - -
Trre1g03083 1343 MobiDBLite consensus disorder prediction 1318 1343 - -
Trre1g03083 1343 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 11 1040 - -
Trre1g03083 1343 ProSiteProfiles CID domain profile. 798 939 IPR006569 -
Trre1g03083 1343 MobiDBLite consensus disorder prediction 527 553 - -
Trre1g03083 1343 FunFam Enhancer of ag-4 2 798 941 - -
Trre1g03083 1343 MobiDBLite consensus disorder prediction 358 402 - -
Trre1g03083 1343 MobiDBLite consensus disorder prediction 1079 1116 - -
Trre1g03083 1343 SMART 558neu5 805 936 IPR006569 -
Trre1g03083 1343 MobiDBLite consensus disorder prediction 766 794 - -
Trre1g03083 1343 MobiDBLite consensus disorder prediction 296 331 - -
Trre1g03083 1343 Coils Coil 118 138 - -
Trre1g03083 1343 MobiDBLite consensus disorder prediction 101 135 - -
Trre1g03083 1343 MobiDBLite consensus disorder prediction 177 209 - -
Trre1g03083 1343 MobiDBLite consensus disorder prediction 1076 1140 - -
Trre1g03083 1343 MobiDBLite consensus disorder prediction 363 402 - -
Trre1g03083 1343 Gene3D - 803 939 IPR008942 -
Trre1g03083 1343 MobiDBLite consensus disorder prediction 1117 1140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g03083 Trre-Chr1 26518423 26526104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g03083 - - psat:127092443 1773.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g03083 1 26518423 26526104 Trre1g03083 1 26518423 26526104 ECH
Trre13g03764 13 45729705 45733335 Trre1g03083 1 26518423 26526104 PCT